Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 3.4e-136 488.4 265 100.0
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 7.0e-105 384.4 221 88.2
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 2.9e-103 379.0 230 84.8
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 6.1e-101 371.3 222 83.8
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 1.3e-98 363.6 198 91.9
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 8.3e-98 360.9 223 83.9
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 2.3e-92 342.8 220 79.5
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 1.7e-87 326.6 224 73.7
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 1.2e-85 320.5 224 71.9
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 1.6e-85 320.1 225 72.9
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 1.0e-84 317.4 223 73.5
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 9.8e-83 310.8 223 71.3
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 5.6e-78 295.0 225 68.9
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 1.2e-75 287.3 205 74.1
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 5.8e-75 285.0 198 73.7
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 6.4e-74 281.6 199 72.4
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 1.4e-73 280.4 257 59.5
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 7.0e-73 278.1 237 64.6
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 3.5e-72 275.8 198 73.7
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 6.0e-72 275.0 198 71.7
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 6.0e-72 275.0 202 70.3
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 5.1e-71 271.9 226 65.5
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 6.6e-71 271.6 204 69.1
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 2.5e-70 269.6 201 70.6
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 2.5e-70 269.6 198 72.2
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 5.6e-70 268.5 215 66.0
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 2.1e-69 266.5 208 69.2
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 2.8e-69 266.2 198 70.7
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 8.1e-69 264.6 199 68.8
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 1.1e-68 264.2 201 71.1
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 1.4e-68 263.8 208 66.8
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 1.4e-68 263.8 222 61.3
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 3.1e-68 262.7 200 69.5
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 3.1e-68 262.7 233 63.5
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 4.0e-68 262.3 208 68.8
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 4.0e-68 262.3 218 62.8
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 4.0e-68 262.3 236 62.3
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 4.0e-68 262.3 236 62.3
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 4.0e-68 262.3 208 68.3
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 6.8e-68 261.5 206 69.9
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.2e-67 260.8 239 61.1
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.2e-67 260.8 239 61.1
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 1.5e-67 260.4 213 66.7
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 4.4e-67 258.8 198 67.7
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 5.8e-67 258.5 180 73.9
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 7.5e-67 258.1 238 59.2
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 9.9e-67 257.7 211 64.5
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 9.9e-67 257.7 201 68.2
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 1.3e-66 257.3 212 64.2
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 2.2e-66 256.5 201 65.2
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 3.7e-66 255.8 210 64.3
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 3.7e-66 255.8 199 67.8
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 3.7e-66 255.8 199 67.8
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 8.3e-66 254.6 199 66.8
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 8.3e-66 254.6 180 72.8
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 1.9e-65 253.4 215 63.7
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 1.9e-65 253.4 201 67.2
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 3.2e-65 252.7 180 72.2
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 1.2e-64 250.8 198 65.7
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.6e-64 250.4 199 66.3
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 2.7e-64 249.6 211 64.5
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 3.5e-64 249.2 210 63.8
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 6.0e-64 248.4 235 60.4
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 2.3e-63 246.5 218 60.6
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 3.9e-63 245.7 238 56.3
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 1.5e-62 243.8 229 59.0
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 1.9e-62 243.4 219 61.6
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 4.3e-62 242.3 215 62.3
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 6.2e-61 238.4 264 53.4
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 8.1e-61 238.0 208 60.1
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.1e-60 237.7 243 56.8
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 5.2e-60 235.3 195 62.6
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 1.2e-59 234.2 195 61.5
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 1.5e-59 233.8 201 59.2
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 1.7e-58 230.3 210 62.4
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 1.4e-57 227.3 190 62.6
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 3.2e-57 226.1 200 61.0
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 9.2e-57 224.6 198 58.6
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 2.1e-56 223.4 198 58.6
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 1.3e-55 220.7 208 57.2
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 2.3e-55 219.9 211 58.3
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 3.0e-55 219.5 203 59.1
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 3.9e-55 219.2 187 63.6
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 3.9e-55 219.2 206 59.7
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 3.9e-55 219.2 214 57.9
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 8.7e-55 218.0 209 56.5
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 1.5e-54 217.2 207 57.5
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 2.5e-54 216.5 222 55.9
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 2.5e-54 216.5 189 63.0
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 3.3e-54 216.1 189 60.8
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 4.3e-54 215.7 236 52.5
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 5.6e-54 215.3 207 57.5
CiPaw.01G128900 Carya illinoinensis HOM05D005860 ORTHO05D006977 5.6e-54 215.3 222 54.5
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 7.3e-54 214.9 213 56.8
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 1.3e-53 214.2 184 69.0
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 1.6e-53 213.8 201 58.7
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 3.6e-53 212.6 212 56.6
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 6.2e-53 211.8 240 52.5
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 1.1e-52 211.1 209 56.9
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 1.1e-52 211.1 209 56.9
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 1.1e-52 211.1 217 53.9
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 1.4e-52 210.7 207 55.6
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 4.0e-52 209.1 189 60.3
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 1.2e-51 207.6 207 56.0
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 2.4e-49 199.9 216 51.9
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 1.2e-48 197.6 210 54.3
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 1.3e-42 177.6 204 52.0
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 7.9e-40 168.3 171 52.0
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 2.1e-37 160.2 123 72.4
Prupe.3G302700 Prunus persica HOM05D005860 ORTHO05D006977 4.2e-33 146.0 109 67.0
Rhsim08G0044900 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.6e-32 144.1 156 52.6
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 1.8e-31 140.6 196 49.5
HPP92_024250 Vanilla planifolia HOM05D005860 ORTHO05D006977 1.8e-23 114.0 112 54.5
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 6.7e-23 112.1 110 55.5
HPP92_024230 Vanilla planifolia HOM05D005860 ORTHO05D006977 2.5e-22 110.2 112 52.7
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 9.7e-22 108.2 111 59.5
ATR0686G162 Amborella trichopoda HOM05D005860 ORTHO05D006977 3.7e-21 106.3 143 42.0
Mapoly0029s0044 Marchantia polymorpha HOM05D005860 ORTHO05D006977 3.1e-20 103.2 170 38.2
Lsat_1_v5_gn_4_185440 Lactuca sativa HOM05D005860 ORTHO05D006977 6.9e-20 102.1 122 48.4
Pp3c15_12290 Physcomitrium patens HOM05D005860 ORTHO05D006977 7.7e-19 98.6 179 34.1
TAR374G0650 Trochodendron aralioides HOM05D005860 ORTHO05D006977 1.3e-18 97.8 212 34.9
AagrBONN_evm.TU.Sc2ySwM_117.926 Anthoceros agrestis HOM05D000273 ORTHO05D006977 4.2e-17 92.8 154 35.7
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 2.7e-16 90.1 87 63.2
vmacro18328 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.5e-14 84.3 88 56.8
HPP92_024251 Vanilla planifolia HOM05D005860 ORTHO05D006977 1.5e-14 84.3 91 51.6
Pp3c9_18330 Physcomitrium patens HOM05D005860 ORTHO05D006977 4.8e-13 79.3 170 32.4
vmacro18329 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.6e-08 64.3 162 34.0
FAN14G0528 Fragaria x ananassa HOM05D005860 ORTHO05D006977 2.1e-08 63.9 54 57.4
Mapoly0007s0012 Marchantia polymorpha HOM05D005860 ORTHO05D006977 4.7e-08 62.8 127 33.1
BcaC05g27015 Brassica carinata HOM05D005860 ORTHO05D006977 2.6e-06 57.0 50 58.0


User provided reference genes

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