Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 9.1e-227 790.0 439 100.0
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 7.6e-181 637.5 445 81.3
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 6.0e-170 601.3 357 89.9
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 7.4e-160 567.8 442 70.6
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 8.2e-159 564.3 450 72.2
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 2.1e-154 549.7 447 70.7
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.7e-148 530.0 450 68.9
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 3.2e-147 525.8 364 77.5
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 1.1e-144 517.3 439 67.2
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 9.1e-134 481.1 453 64.2
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 3.8e-132 475.7 452 63.5
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 7.7e-117 424.9 371 66.6
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 5.4e-110 402.1 451 54.8
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 1.1e-107 394.4 482 51.2
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 2.5e-107 393.3 460 51.5
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 2.1e-106 390.2 453 51.4
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 2.3e-105 386.7 422 55.0
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 8.9e-105 384.8 469 50.5
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 4.4e-104 382.5 453 51.7
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 9.8e-104 381.3 481 50.3
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 2.4e-102 376.7 442 51.4
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 4.1e-102 375.9 451 51.0
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 2.7e-101 373.2 476 49.8
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 5.9e-101 372.1 464 50.4
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.3e-100 370.9 414 53.6
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 2.9e-100 369.8 463 49.0
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 5.0e-100 369.0 441 52.4
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 8.6e-100 368.2 368 57.6
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 7.3e-99 365.2 496 47.8
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 3.1e-97 359.8 454 50.4
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.4e-96 355.9 459 49.7
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 4.9e-95 352.4 446 50.0
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 6.4e-95 352.1 451 49.0
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.0e-93 347.1 452 49.3
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 5.0e-92 342.4 414 51.7
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 6.6e-92 342.0 407 49.1
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.6e-90 337.4 477 45.7
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.4e-89 334.3 468 47.2
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 3.1e-89 333.2 398 51.3
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 8.9e-89 331.6 410 51.7
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 2.0e-88 330.5 452 50.7
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 3.4e-88 329.7 447 49.2
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 7.5e-88 328.6 379 50.7
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 9.8e-88 328.2 416 49.0
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 9.8e-88 328.2 417 48.4
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 1.7e-87 327.4 444 48.2
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 3.7e-87 326.2 455 47.9
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 4.9e-87 325.9 440 47.0
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 1.4e-86 324.3 485 45.8
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 1.4e-86 324.3 444 47.1
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.9e-86 323.9 442 46.8
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.9e-86 323.9 460 44.1
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 2.4e-86 323.6 377 51.7
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.2e-85 321.2 445 48.5
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 3.5e-85 319.7 445 47.6
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.0e-84 318.2 350 52.9
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 1.7e-84 317.4 443 45.8
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 1.9e-83 313.9 441 47.6
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 5.6e-83 312.4 369 49.9
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 3.6e-82 309.7 249 61.8
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 1.4e-81 307.8 370 48.4
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 1.2e-80 304.7 441 44.4
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 3.4e-80 303.1 453 44.4
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 1.7e-79 300.8 249 61.4
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 2.2e-79 300.4 372 48.1
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.2e-79 300.4 371 49.1
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 2.9e-79 300.1 455 44.4
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.1e-78 298.1 378 47.6
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.4e-78 297.7 377 48.0
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 5.4e-78 295.8 348 48.0
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 9.2e-78 295.0 378 48.1
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 2.7e-77 293.5 377 47.2
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 4.6e-77 292.7 351 49.6
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 4.6e-77 292.7 542 39.7
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 6.0e-77 292.4 256 58.6
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.0e-76 291.6 380 46.8
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 1.7e-76 290.8 252 60.3
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 1.7e-76 290.8 446 45.7
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 3.9e-76 289.7 386 46.9
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 3.9e-76 289.7 386 46.9
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 6.6e-76 288.9 421 43.7
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 8.6e-76 288.5 220 65.0
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 3.6e-74 283.1 326 49.4
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 4.4e-72 276.2 342 49.4
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 1.9e-70 270.8 454 41.0
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.0e-68 265.0 337 47.2
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 3.9e-68 263.1 249 57.0
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 3.9e-68 263.1 440 40.7
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.9e-67 260.8 344 45.9
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 9.6e-67 258.5 205 70.7
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.3e-66 258.1 439 44.4
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.1e-65 255.0 306 52.9
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 1.4e-65 254.6 341 49.0
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.2e-64 251.5 367 43.1
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 4.4e-64 249.6 395 42.0
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 1.6e-61 241.1 274 51.8
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.5e-59 234.6 446 38.3
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 7.3e-59 232.3 367 39.0
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.8e-52 211.1 283 42.0
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.1e-51 208.4 142 70.4
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.1e-49 201.8 122 77.9
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.4e-49 201.4 332 38.0
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 3.1e-49 200.3 166 56.6
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 5.8e-48 196.1 169 60.4
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 3.8e-47 193.4 253 41.9
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.4e-46 191.4 123 75.6
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 5.5e-46 189.5 457 33.3
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 8.7e-44 182.2 254 43.3
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.2e-32 145.2 214 43.9
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 3.4e-32 143.7 98 75.5
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 1.4e-28 131.7 181 42.0
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 6.7e-28 129.4 127 54.3
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 4.8e-26 123.2 345 34.8
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 6.1e-21 106.3 83 67.5
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 2.6e-19 100.9 176 35.8
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 3.3e-19 100.5 230 29.1
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 3.7e-18 97.1 243 31.7
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 6.7e-12 76.3 271 32.5
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 4.8e-10 70.1 118 40.7
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 1.3e-07 62.0 75 48.0


User provided reference genes

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