Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G162300 Glycine max HOM05D009465 ORTHO05D012186 1.4e-240 835.9 431 100.0
Glyma.16G211600 Glycine max HOM05D009465 ORTHO05D012186 7.6e-226 786.9 431 93.3
Phvul.004G137500 Phaseolus vulgaris HOM05D009465 ORTHO05D012186 3.7e-196 688.3 432 84.5
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 3.7e-196 688.3 432 84.0
arahy.Tifrunner.gnm1.ann1.KQ9JXS Arachis hypogaea HOM05D009465 ORTHO05D012186 3.5e-178 628.6 431 75.2
arahy.Tifrunner.gnm1.ann1.HHM7P8 Arachis hypogaea HOM05D009465 ORTHO05D012186 7.7e-178 627.5 431 75.2
Lalb_Chr22g0354041 Lupinus albus HOM05D009465 ORTHO05D012186 1.0e-166 590.5 417 74.8
Lj2g0000979 Lotus japonicus HOM05D009465 ORTHO05D012186 3.1e-163 578.9 424 74.1
Lalb_Chr14g0370161 Lupinus albus HOM05D009465 ORTHO05D012186 1.0e-161 573.9 409 73.6
Psat1g121040 Pisum sativum HOM05D009465 ORTHO05D012186 6.3e-156 554.7 432 70.1
Ca_25367_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 1.2e-151 540.4 426 68.1
TPR.G3721 Trifolium pratense HOM05D009465 ORTHO05D012186 3.6e-143 512.3 432 66.4
Glyma.06G310000 Glycine max HOM05D000005 ORTHO05D000012 1.1e-78 298.1 337 50.7
Phvul.005G016500 Phaseolus vulgaris HOM05D000005 ORTHO05D012186 1.4e-73 281.2 346 49.7
Lj3g0008516 Lotus japonicus HOM05D000005 ORTHO05D000012 1.7e-68 264.2 336 48.2
arahy.Tifrunner.gnm1.ann1.S5VFF6 Arachis hypogaea HOM05D000005 ORTHO05D000012 7.2e-67 258.8 336 45.8
arahy.Tifrunner.gnm1.ann1.5MQ2SU Arachis hypogaea HOM05D000005 ORTHO05D000012 4.7e-66 256.1 336 45.5
Medtr3g012470 Medicago truncatula HOM05D000005 ORTHO05D000012 5.2e-65 252.7 368 45.4
Ca_14232_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 8.0e-58 228.8 336 43.5
Psat3g161560 Pisum sativum HOM05D009465 ORTHO05D012186 2.6e-56 223.8 240 54.2
TPR.G9971 Trifolium pratense HOM05D009465 ORTHO05D012186 1.7e-55 221.1 255 53.3
arahy.Tifrunner.gnm1.ann1.2C57RQ Arachis hypogaea HOM05D000005 ORTHO05D000012 1.2e-48 198.4 322 41.9
Lj2g0012327 Lotus japonicus HOM05D000005 ORTHO05D000012 9.8e-48 195.3 260 43.8
Lalb_Chr22g0354031 Lupinus albus HOM05D000005 ORTHO05D000012 2.8e-47 193.7 253 47.4
arahy.Tifrunner.gnm1.ann1.RYL35A Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-46 191.0 268 45.1
Ca_25368_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 3.1e-46 190.3 314 40.8
arahy.Tifrunner.gnm1.ann1.F56ZG1 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.2e-45 188.3 248 46.8
TPR.G28367 Trifolium pratense HOM05D009465 ORTHO05D012186 1.2e-45 188.3 263 43.3
Ca_25369_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 1.6e-45 188.0 325 38.8
Lj2g0014678 Lotus japonicus HOM05D000005 ORTHO05D000012 7.7e-45 185.7 286 45.1
Psat1g120400 Pisum sativum HOM05D000005 ORTHO05D012186 4.2e-43 179.9 242 44.2
arahy.Tifrunner.gnm1.ann1.GK6QJJ Arachis hypogaea HOM05D001484 ORTHO05D001564 4.7e-42 176.4 334 36.2
arahy.Tifrunner.gnm1.ann1.WVJ4GZ Arachis hypogaea HOM05D000005 ORTHO05D000012 1.0e-41 175.3 249 44.6
arahy.Tifrunner.gnm1.ann1.71Y0FT Arachis hypogaea HOM05D000005 ORTHO05D000012 4.0e-41 173.3 320 37.8
arahy.Tifrunner.gnm1.ann1.MNHF94 Arachis hypogaea HOM05D000005 ORTHO05D000012 4.0e-41 173.3 320 37.8
arahy.Tifrunner.gnm1.ann1.KU4K90 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.2e-39 167.5 249 43.4
arahy.Tifrunner.gnm1.ann1.ID9NSH Arachis hypogaea HOM05D000005 ORTHO05D000012 3.2e-38 163.7 291 38.1
TPR.G3228 Trifolium pratense HOM05D009465 ORTHO05D012186 4.1e-38 163.3 196 49.5
arahy.Tifrunner.gnm1.ann1.H8JIAA Arachis hypogaea HOM05D000005 ORTHO05D000012 1.3e-36 158.3 275 42.2
arahy.Tifrunner.gnm1.ann1.HVB0T8 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.7e-36 157.9 252 42.9
arahy.Tifrunner.gnm1.ann1.NC3JHS Arachis hypogaea HOM05D000001 ORTHO05D000003 5.6e-35 152.9 210 44.8
arahy.Tifrunner.gnm1.ann1.0HIU69 Arachis hypogaea HOM05D009465 ORTHO05D012186 9.5e-35 152.1 225 44.0
arahy.Tifrunner.gnm1.ann1.C97LW1 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.8e-34 150.6 249 39.4
arahy.Tifrunner.gnm1.ann1.1EPI1N Arachis hypogaea HOM05D000005 ORTHO05D000012 8.0e-34 149.1 294 37.1
arahy.Tifrunner.gnm1.ann1.ET89BN Arachis hypogaea HOM05D000005 ORTHO05D000012 1.0e-33 148.7 295 36.9
arahy.Tifrunner.gnm1.ann1.BXGY4D Arachis hypogaea HOM05D009465 ORTHO05D017464 1.8e-33 147.9 234 38.0
Medtr6g078420 Medicago truncatula HOM05D000005 ORTHO05D000012 2.9e-31 140.6 198 42.9
arahy.Tifrunner.gnm1.ann1.N3L79K Arachis hypogaea HOM05D009465 ORTHO05D017464 1.9e-30 137.9 233 36.5
arahy.Tifrunner.gnm1.ann1.XFY5VA Arachis hypogaea HOM05D000001 ORTHO05D000003 7.0e-30 136.0 166 45.8
arahy.Tifrunner.gnm1.ann1.68FRR6 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.0e-28 130.6 244 39.8
TPR.G19269 Trifolium pratense HOM05D009465 ORTHO05D017464 3.0e-28 130.6 232 38.4
Psat0s1832g0040 Pisum sativum HOM05D009465 ORTHO05D017464 4.7e-26 123.2 230 36.5
Psat1g120040 Pisum sativum HOM05D009465 ORTHO05D017464 4.7e-26 123.2 230 36.5
arahy.Tifrunner.gnm1.ann1.8EI7FZ Arachis hypogaea HOM05D000007 ORTHO05D000039 6.4e-23 112.8 176 42.0
arahy.Tifrunner.gnm1.ann1.EW42QP Arachis hypogaea HOM05D000005 ORTHO05D000012 1.7e-15 88.2 135 43.7
Ca_25370_v3 Cicer arietinum L. HOM05D009465 ORTHO05D017464 7.1e-14 82.8 133 40.6
VMungo0464G1615 Vigna mungo HOM05D009465 ORTHO05D017464 1.6e-13 81.6 159 38.4
QL04p053587 Quercus lobata HOM05D000009 ORTHO05D010531 5.1e-12 76.6 207 27.1
QL04p053556 Quercus lobata HOM05D000009 ORTHO05D010531 4.3e-11 73.6 180 30.6
VMungo0464G1659 Vigna mungo HOM05D009465 ORTHO05D012186 1.6e-10 71.6 84 50.0
Nn4g24733 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.3e-07 62.0 79 45.6
arahy.Tifrunner.gnm1.ann1.YKF62D Arachis hypogaea HOM05D009465 ORTHO05D012186 2.9e-07 60.8 125 38.4
COL.COLO4_16743 Corchorus olitorius HOM05D000030 ORTHO05D034864 2.9e-07 60.8 80 46.2
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.4e-07 59.3 77 44.2
Ah.02g113190 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.9e-06 58.2 62 50.0
Nn5g27667 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.9e-06 58.2 78 43.6
Ah.06g182990 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.4e-06 57.8 62 50.0
Ah.10g027040 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.4e-06 57.8 62 50.0
Ah.12g060160 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.4e-06 57.8 62 50.0


User provided reference genes

Program Settings