Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 0.0e+00 1241.1 639 100.0
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 1.6e-264 916.0 704 73.6
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 4.7e-264 914.4 704 73.4
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 9.6e-193 677.6 701 60.5
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 4.1e-167 592.4 683 56.7
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 2.5e-164 583.2 762 49.6
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 2.8e-160 569.7 712 51.4
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 1.2e-147 527.7 647 52.7
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 3.6e-147 526.2 723 49.7
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 2.6e-145 520.0 708 49.4
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 1.5e-132 477.6 688 48.1
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 4.1e-66 256.9 403 44.4
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 1.4e-58 231.9 581 35.1
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 2.5e-55 221.1 590 34.7
Psat7g226800 Pisum sativum HOM05D012459 ORTHO05D010844 3.8e-48 197.2 464 37.3
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 6.8e-21 106.7 558 27.8
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 1.5e-20 105.5 465 26.9
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 7.5e-20 103.2 544 28.5
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 2.8e-19 101.3 535 27.7
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 1.2e-17 95.9 380 31.3
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 1.7e-16 92.0 348 28.2
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 5.0e-16 90.5 661 23.6
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.5e-15 89.0 403 30.8
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 4.3e-15 87.4 530 24.3
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 4.3e-15 87.4 691 24.0
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 5.6e-15 87.0 500 28.0
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 9.5e-15 86.3 715 24.9
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.2e-14 85.9 509 27.3
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 3.6e-14 84.3 298 33.6
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 1.8e-13 82.0 361 28.5
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 4.0e-13 80.9 153 39.2
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 6.8e-13 80.1 677 25.4
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 2.6e-12 78.2 331 29.9
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 5.8e-12 77.0 519 26.6
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 5.8e-12 77.0 361 28.5
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 3.7e-11 74.3 157 34.4
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 4.9e-11 73.9 697 24.8
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 6.4e-11 73.6 673 25.3
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 8.3e-11 73.2 413 28.1
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 3.2e-10 71.2 414 25.6
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 2.7e-09 68.2 421 28.0
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 4.6e-09 67.4 556 24.1
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 1.7e-08 65.5 176 31.8
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 3.9e-08 64.3 176 31.8
Nn3g21159 Nelumbo nucifera HOM05D012218 ORTHO05D019306 3.3e-07 61.2 378 25.9
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 4.3e-07 60.8 444 26.4
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 1.6e-06 58.9 379 25.3
Oeu028233.1 Olea europaea HOM05D010873 ORTHO05D013124 8.0e-06 56.6 150 31.3


User provided reference genes

Program Settings