Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G157500 Glycine max HOM05D009279 ORTHO05D011257 1.3e-171 606.3 316 100.0
Glyma.16G208000 Glycine max HOM05D009279 ORTHO05D011257 3.8e-158 561.6 311 92.3
VMungo0464G0081 Vigna mungo HOM05D009279 ORTHO05D011257 1.2e-103 380.6 320 69.4
Phvul.004G132600 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 3.2e-96 355.9 318 67.6
Lj2g0023311 Lotus japonicus HOM05D009279 ORTHO05D011257 5.8e-82 308.5 324 58.6
Lalb_Chr03g0033361 Lupinus albus HOM05D009279 ORTHO05D011257 8.4e-81 304.7 329 57.1
Glyma.20G214900 Glycine max HOM05D009279 ORTHO05D011257 1.4e-75 287.3 331 56.5
Phvul.007G114700 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 3.1e-75 286.2 320 55.9
Lalb_Chr06g0168731 Lupinus albus HOM05D009279 ORTHO05D011257 9.0e-75 284.6 321 54.5
Glyma.10G175600 Glycine max HOM05D009279 ORTHO05D011257 1.2e-74 284.3 328 56.4
VMungo0720G2603 Vigna mungo HOM05D009279 ORTHO05D011257 5.3e-67 258.8 321 52.3
Lj5g0013459 Lotus japonicus HOM05D009279 ORTHO05D011257 5.5e-64 248.8 302 50.3
Medtr1g077140 Medicago truncatula HOM05D009279 ORTHO05D011257 3.0e-62 243.0 315 48.6
arahy.Tifrunner.gnm1.ann1.JKND9T Arachis hypogaea HOM05D009279 ORTHO05D011257 6.2e-60 235.3 331 47.4
Psat6g111800 Pisum sativum HOM05D009279 ORTHO05D011257 2.0e-58 230.3 326 48.5
TPR.G16621 Trifolium pratense HOM05D009279 ORTHO05D011257 1.0e-57 228.0 323 47.7
Psat6g111760 Pisum sativum HOM05D009279 ORTHO05D011257 2.9e-57 226.5 307 48.9
Ca_09909_v3 Cicer arietinum L. HOM05D009279 ORTHO05D011257 2.8e-52 209.9 321 43.6
Cfa020940 Carpinus fangiana HOM05D009279 ORTHO05D011257 4.1e-43 179.5 330 42.1
Haze_19372 Corylus avellana HOM05D009279 ORTHO05D011257 1.9e-40 170.6 320 39.7
TWI79G0814 Tripterygium wilfordii HOM05D009279 ORTHO05D011257 1.1e-37 161.4 331 38.1
EL10Ac4g09710 Beta vulgaris HOM05D009279 ORTHO05D011257 2.1e-31 140.6 324 34.0
Potri.T013100 Populus trichocarpa HOM05D009279 ORTHO05D011257 1.8e-30 137.5 345 35.9
Cpa.g.sc138.53 Carica papaya HOM05D009279 ORTHO05D011257 1.3e-28 131.3 325 34.8
Thecc.01G145700 Theobroma cacao HOM05D009279 ORTHO05D011257 2.8e-28 130.2 323 36.8
AUR62000582 Chenopodium quinoa HOM05D009279 ORTHO05D011257 6.3e-28 129.0 326 33.1
Aqoxy6G00047 Aquilegia oxysepala HOM05D009279 ORTHO05D011257 3.1e-27 126.7 345 31.9
AUR62006938 Chenopodium quinoa HOM05D009279 ORTHO05D011257 4.2e-16 89.7 245 29.8
Zm00001eb167950 Zea mays HOM05D009279 ORTHO05D011257 1.1e-11 75.1 330 24.8
Sc16g0009940 Simmondsia chinensis HOM05D009279 ORTHO05D011257 1.8e-11 74.3 161 35.4
Potri.018G145526 Populus trichocarpa HOM05D009279 ORTHO05D011257 1.0e-09 68.6 148 37.8
HPP92_024400 Vanilla planifolia HOM05D009279 ORTHO05D011257 1.7e-09 67.8 346 26.3
Pp3c20_12050 Physcomitrium patens HOM05D002440 ORTHO05D002576 1.2e-07 61.6 324 26.5
Pp3c23_16590 Physcomitrium patens HOM05D002440 ORTHO05D002576 6.1e-07 59.3 324 25.3
Pp3c23_10870 Physcomitrium patens HOM05D002440 ORTHO05D002576 5.2e-06 56.2 360 26.7


User provided reference genes

Program Settings