Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-130 469.9 239 100.0
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 3.2e-117 425.2 244 90.2
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 6.3e-113 411.0 244 86.5
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.8e-107 392.9 242 83.9
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 8.2e-97 357.5 241 76.3
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 5.3e-96 354.8 243 74.1
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 7.0e-96 354.4 243 74.5
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 9.1e-96 354.0 244 76.6
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 1.3e-94 350.1 244 75.8
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 3.2e-93 345.5 240 75.8
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.6e-90 335.9 238 74.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 4.8e-89 331.6 238 73.5
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 5.2e-83 311.6 246 67.5
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 7.5e-82 307.8 246 67.1
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.9e-81 305.1 247 64.0
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.0e-79 299.7 239 65.3
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 3.5e-79 298.9 241 64.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 3.5e-79 298.9 239 64.4
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 1.7e-78 296.6 259 61.0
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.9e-77 293.1 240 65.0
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.3e-77 292.4 237 63.3
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 1.2e-76 290.4 246 63.0
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.2e-76 290.4 237 63.3
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 4.7e-76 288.5 255 61.2
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 8.0e-76 287.7 237 62.9
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.0e-75 287.3 240 63.3
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.4e-75 287.0 247 62.3
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.4e-75 287.0 247 64.4
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.8e-75 286.6 258 58.5
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.0e-75 285.4 238 65.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 5.2e-75 285.0 238 64.3
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 6.8e-75 284.6 243 62.6
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 8.9e-75 284.3 245 63.7
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.2e-74 283.9 243 60.5
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 2.0e-74 283.1 238 66.4
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.4e-74 282.0 237 61.6
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 5.8e-74 281.6 243 61.7
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.3e-73 280.4 237 62.0
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 2.9e-73 279.3 241 59.8
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 2.9e-73 279.3 237 62.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.9e-73 278.5 188 72.9
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.9e-73 278.5 237 61.6
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 6.4e-73 278.1 245 60.8
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 8.3e-73 277.7 242 60.3
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 2.4e-72 276.2 237 61.2
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 7.0e-72 274.6 248 60.5
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 7.0e-72 274.6 247 60.7
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 9.2e-72 274.2 244 61.1
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.2e-71 273.9 188 71.3
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.2e-71 273.9 240 62.9
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.0e-71 273.1 222 65.8
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.0e-71 273.1 242 59.9
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.7e-71 272.7 218 62.8
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.5e-71 272.3 188 71.8
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 6.0e-71 271.6 249 58.6
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 7.8e-71 271.2 253 58.9
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 1.3e-70 270.4 255 55.3
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.3e-70 270.4 260 54.6
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.1e-69 267.3 242 58.3
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.1e-69 267.3 190 70.0
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 2.5e-69 266.2 236 60.2
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 5.6e-69 265.0 252 55.6
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 2.3e-67 259.6 213 63.4
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 6.8e-67 258.1 186 65.6
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.5e-66 256.9 211 62.1
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 4.4e-66 255.4 247 55.5
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.9e-65 251.9 211 60.7
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 1.1e-64 250.8 201 65.2
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.9e-64 250.0 210 59.5
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 3.2e-64 249.2 251 54.6
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 9.2e-64 247.7 238 56.3
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 7.8e-63 244.6 256 52.3
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.3e-62 243.8 240 55.8
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.9e-62 242.3 188 67.0
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 6.6e-62 241.5 238 56.7
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 8.6e-62 241.1 209 60.3
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 8.6e-62 241.1 209 60.3
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.5e-61 240.4 230 56.5
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 2.5e-61 239.6 209 58.9
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 2.5e-61 239.6 209 60.3
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 2.5e-61 239.6 209 59.8
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 3.3e-61 239.2 188 60.6
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 4.3e-61 238.8 205 60.0
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.2e-60 237.3 212 60.8
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.2e-60 237.3 242 56.2
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.6e-60 236.9 236 54.7
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.6e-60 235.7 171 67.8
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 8.1e-60 234.6 185 62.7
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.8e-59 233.4 245 49.4
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 1.2e-58 230.7 203 60.1
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.4e-56 223.8 243 51.4
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 4.1e-56 222.2 168 70.2
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 5.1e-54 215.3 144 70.8
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 3.3e-53 212.6 187 56.1
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.9e-49 199.5 141 68.8
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 4.9e-49 198.7 180 53.9
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 8.7e-46 188.0 177 52.0
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.5e-45 187.2 181 54.1
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.8e-43 180.3 243 45.3
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-42 177.6 214 44.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.5e-42 177.2 203 46.8
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 2.0e-42 176.8 179 50.8
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 5.8e-42 175.3 200 50.0
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.9e-41 172.9 185 46.5
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.8e-41 172.6 216 44.0
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-36 157.5 174 52.9
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.9e-33 145.6 243 37.9
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 5.1e-30 135.6 88 71.6
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 3.3e-29 132.9 142 53.5
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.4e-26 122.9 94 61.7
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.7e-25 120.6 175 40.0
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 7.1e-24 115.2 83 67.5
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 1.5e-18 97.4 67 68.7
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.0e-17 94.7 145 40.7
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 3.5e-15 86.3 130 38.5
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 7.9e-15 85.1 98 41.8
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 2.4e-11 73.6 77 50.6
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 2.5e-08 63.5 40 75.0
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 6.1e-07 58.9 93 41.9
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 1.8e-06 57.4 77 37.7


User provided reference genes

Program Settings