Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G141900 Glycine max HOM05D000621 ORTHO05D000421 2.6e-52 208.4 99 100.0
VMungo0720G2260 Vigna mungo HOM05D000621 ORTHO05D000421 1.3e-16 89.7 103 51.5
Glyma.02G064600 Glycine max HOM05D000621 ORTHO05D000421 1.5e-15 86.3 89 56.2
Phvul.007G202900 Phaseolus vulgaris HOM05D000621 ORTHO05D000421 1.6e-14 82.8 101 47.5
Glyma.20G095500 Glycine max HOM05D000621 ORTHO05D000421 1.4e-13 79.7 110 44.5
Glyma.16G177700 Glycine max HOM05D001243 ORTHO05D000843 4.4e-12 74.7 86 53.5
Glyma.09G130100 Glycine max HOM05D000621 ORTHO05D000421 5.8e-12 74.3 79 57.0
Lalb_Chr06g0167411 Lupinus albus HOM05D000621 ORTHO05D000421 9.9e-12 73.6 107 44.9
Lalb_Chr21g0310171 Lupinus albus HOM05D000621 ORTHO05D000421 6.4e-11 70.9 107 43.9
arahy.Tifrunner.gnm1.ann1.492HD2 Arachis hypogaea HOM05D000621 ORTHO05D000421 1.9e-10 69.3 87 46.0
arahy.Tifrunner.gnm1.ann1.CG4MLB Arachis hypogaea HOM05D000621 ORTHO05D000421 1.9e-10 69.3 87 46.0
TPR.G2597 Trifolium pratense HOM05D000621 ORTHO05D000421 2.4e-10 68.9 103 38.8
Ca_10185_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 1.6e-09 66.2 90 42.2
THA.LOC104823716 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 4.6e-09 64.7 92 41.3
Ciclev10001744m.g Citrus clementina HOM05D000621 ORTHO05D000421 7.8e-09 63.9 105 40.0
Lalb_Chr02g0147681 Lupinus albus HOM05D000621 ORTHO05D000421 1.3e-08 63.2 107 43.0
TWI56G1461 Tripterygium wilfordii HOM05D000621 ORTHO05D000421 1.3e-08 63.2 107 40.2
Thhalv10009728m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 1.7e-08 62.8 99 37.4
Psat6g154280 Pisum sativum HOM05D000621 ORTHO05D000421 2.3e-08 62.4 100 35.0
Psat6g153280 Pisum sativum HOM05D000621 ORTHO05D000421 3.0e-08 62.0 103 37.9
Lj5g0023639 Lotus japonicus HOM05D000621 ORTHO05D000421 6.6e-08 60.8 97 37.1
Sp1g07930 Schrenkiella parvula HOM05D000621 ORTHO05D000421 6.6e-08 60.8 99 36.4
Cc02_g35280 Coffea canephora HOM05D000621 ORTHO05D000421 8.6e-08 60.5 88 40.9
HanXRQChr05g0135641 Helianthus annuus HOM05D000621 ORTHO05D000421 1.9e-07 59.3 87 32.2
CANSAT54G1464 Cannabis sativa HOM05D000621 ORTHO05D000421 5.6e-07 57.8 105 39.0
Gohir.A13G176300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 5.6e-07 57.8 106 34.9
Carub.0001s0866 Capsella rubella HOM05D000621 ORTHO05D000421 7.3e-07 57.4 92 35.9
Rhsim11G0097900 Rhododendron simsii HOM05D000621 ORTHO05D000421 7.3e-07 57.4 90 38.9
Sabra05G0008200 Salix brachista HOM05D000621 ORTHO05D000421 7.3e-07 57.4 97 34.0
Sabra05G0019500 Salix brachista HOM05D000621 ORTHO05D000421 7.3e-07 57.4 97 34.0
TWI12G0894 Tripterygium wilfordii HOM05D000621 ORTHO05D000421 7.3e-07 57.4 107 38.3
Cpa.g.sc48.181 Carica papaya HOM05D000621 ORTHO05D000421 9.5e-07 57.0 105 38.1
Gohir.D13G182700 Gossypium hirsutum HOM05D000621 ORTHO05D000421 9.5e-07 57.0 106 34.0
Gorai.013G208100 Gossypium raimondii HOM05D000621 ORTHO05D000421 9.5e-07 57.0 106 34.0
Manes.09G178400 Manihot esculenta HOM05D000621 ORTHO05D000421 1.2e-06 56.6 90 38.9
Potri.005G011100 Populus trichocarpa HOM05D000621 ORTHO05D000421 1.6e-06 56.2 97 34.0
Aa31LG1G5800 Aethionema arabicum HOM05D000621 ORTHO05D000421 2.1e-06 55.8 97 34.0
BraA06t23815Z Brassica rapa HOM05D000621 ORTHO05D000421 3.6e-06 55.1 105 32.4
A06p06040 Brassica napus HOM05D000621 ORTHO05D000421 4.7e-06 54.7 105 32.4
COL.COLO4_08200 Corchorus olitorius HOM05D000621 ORTHO05D000421 4.7e-06 54.7 95 36.8
Thecc.05G325400 Theobroma cacao HOM05D000621 ORTHO05D000421 4.7e-06 54.7 100 38.0
AT1G09320 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 6.2e-06 54.3 115 33.9
COL.COLO4_07367 Corchorus olitorius HOM05D000621 ORTHO05D000421 6.2e-06 54.3 102 36.3
Medtr4g024780 Medicago truncatula HOM05D001243 ORTHO05D000843 6.2e-06 54.3 80 38.8
BcaC05g24786 Brassica carinata HOM05D000621 ORTHO05D000421 8.1e-06 53.9 112 33.9
BolC5t29489H Brassica oleracea HOM05D000621 ORTHO05D000421 8.1e-06 53.9 112 33.9
COL.COLO4_05529 Corchorus olitorius HOM05D000621 ORTHO05D000421 8.1e-06 53.9 106 34.0
Duzib177G0212 Durio zibethinus HOM05D000621 ORTHO05D000421 8.1e-06 53.9 97 35.1
ECA233G3045 Erigeron canadensis HOM05D000621 ORTHO05D000421 8.1e-06 53.9 94 33.0
Lsat_1_v5_gn_6_15721 Lactuca sativa HOM05D000621 ORTHO05D000421 8.1e-06 53.9 90 33.3
TAR633G2377 Trochodendron aralioides HOM05D000621 ORTHO05D000421 8.1e-06 53.9 88 36.4


User provided reference genes

Program Settings