Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G123400 Glycine max HOM05D001090 ORTHO05D002687 3.3e-92 341.7 170 100.0
Glyma.06G116900 Glycine max HOM05D001090 ORTHO05D002687 8.3e-59 230.7 123 93.5
VMungo1309G1000 Vigna mungo HOM05D001090 ORTHO05D002687 2.8e-54 215.7 123 87.0
Phvul.009G129400 Phaseolus vulgaris HOM05D001090 ORTHO05D002687 1.0e-53 213.8 123 85.4
Ca_16604_v3 Cicer arietinum L. HOM05D001090 ORTHO05D002687 3.4e-52 208.8 123 82.1
TPR.G13471 Trifolium pratense HOM05D001090 ORTHO05D002687 4.4e-52 208.4 123 82.1
Medtr3g088555 Medicago truncatula HOM05D001090 ORTHO05D002687 1.7e-51 206.5 123 81.3
Lj1g0001372 Lotus japonicus HOM05D001090 ORTHO05D002687 2.9e-51 205.7 123 81.3
arahy.Tifrunner.gnm1.ann1.9Y6HC5 Arachis hypogaea HOM05D001090 ORTHO05D002687 6.4e-51 204.5 123 79.7
Lalb_Chr08g0241141 Lupinus albus HOM05D001090 ORTHO05D002687 1.6e-49 199.9 123 79.7
arahy.Tifrunner.gnm1.ann1.V5YSST Arachis hypogaea HOM05D001090 ORTHO05D002687 2.7e-49 199.1 123 78.0
Psat5g085000 Pisum sativum HOM05D001090 ORTHO05D002687 2.7e-49 199.1 123 78.9
Potri.002G078000 Populus trichocarpa HOM05D001090 ORTHO05D002687 4.4e-44 181.8 123 71.5
Actinidia15217 Actinidia chinensis HOM05D001090 ORTHO05D002687 5.4e-42 174.9 123 67.5
Gohir.A02G110100 Gossypium hirsutum HOM05D001090 ORTHO05D002687 1.2e-41 173.7 123 69.1
TWI32G0149 Tripterygium wilfordii HOM05D001090 ORTHO05D002687 2.0e-41 172.9 123 66.7
GSVIVG01008813001 Vitis vinifera HOM05D001090 ORTHO05D002687 3.5e-41 172.2 123 67.5
Gohir.D03G069000 Gossypium hirsutum HOM05D001090 ORTHO05D002687 4.6e-41 171.8 123 68.3
Gorai.013G107400 Gossypium raimondii HOM05D001090 ORTHO05D002687 4.6e-41 171.8 123 68.3
TAR628G0124 Trochodendron aralioides HOM05D001090 ORTHO05D002687 7.8e-41 171.0 123 67.5
CiPaw.15G032300 Carya illinoinensis HOM05D001090 ORTHO05D002687 1.0e-40 170.6 123 65.9
QL09p032695 Quercus lobata HOM05D001090 ORTHO05D002687 1.3e-40 170.2 128 66.4
Sp1g19170 Schrenkiella parvula HOM05D001090 ORTHO05D002687 1.1e-39 167.2 123 65.9
CSS0001559 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D002687 1.5e-39 166.8 123 66.7
CSS0022044 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D002687 1.5e-39 166.8 123 66.7
A08p28880 Brassica napus HOM05D001090 ORTHO05D002687 1.9e-39 166.4 123 64.2
Lsat_1_v5_gn_4_134081 Lactuca sativa HOM05D001090 ORTHO05D002687 2.5e-39 166.0 123 64.2
CSS0005695 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D002687 3.3e-39 165.6 123 65.9
MBI03_g28478_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D002687 3.3e-39 165.6 123 61.8
Prupe.1G490400 Prunus persica HOM05D001090 ORTHO05D002687 3.3e-39 165.6 123 64.2
Thhalv10006535m.g Eutrema salsugineum HOM05D001090 ORTHO05D002687 4.3e-39 165.2 123 65.0
Nn1g08972 Nelumbo nucifera HOM05D001090 ORTHO05D002687 5.6e-39 164.9 123 64.2
Ciclev10000116m.g Citrus clementina HOM05D001090 ORTHO05D002687 7.3e-39 164.5 123 65.0
COL.COLO4_09042 Corchorus olitorius HOM05D001090 ORTHO05D002687 9.5e-39 164.1 123 64.2
Thecc.08G132400 Theobroma cacao HOM05D001090 ORTHO05D002687 9.5e-39 164.1 123 65.0
C08p20970 Brassica napus HOM05D001090 ORTHO05D002687 1.2e-38 163.7 123 62.6
BolC8t49734H Brassica oleracea HOM05D001090 ORTHO05D002687 1.2e-38 163.7 123 62.6
Cfa018122 Carpinus fangiana HOM05D001090 ORTHO05D002687 1.2e-38 163.7 129 61.2
RcHm_v2.0_Chr6g0296621 Rosa chinensis HOM05D001090 ORTHO05D002687 1.6e-38 163.3 123 63.4
Sabra02G0061200 Salix brachista HOM05D001090 ORTHO05D002687 2.1e-38 162.9 145 57.9
Manes.02G167501 Manihot esculenta HOM05D001090 ORTHO05D002687 2.8e-38 162.5 123 65.0
ECA232G2805 Erigeron canadensis HOM05D001090 ORTHO05D002687 3.6e-38 162.2 123 63.4
Manes.02G167701 Manihot esculenta HOM05D001090 ORTHO05D002687 3.6e-38 162.2 123 64.2
AT1G21650 Arabidopsis thaliana HOM05D001090 ORTHO05D002687 1.4e-37 160.2 123 62.6
CANSAT21G2061 Cannabis sativa HOM05D001090 ORTHO05D002687 3.1e-37 159.1 123 63.4
MD00G1100600 Malus domestica HOM05D001090 ORTHO05D002687 6.8e-37 157.9 124 64.5
Aa31LG7G5620 Aethionema arabicum HOM05D001090 ORTHO05D002687 1.2e-36 157.1 127 62.2
Carub.0001s2107 Capsella rubella HOM05D001090 ORTHO05D002687 1.2e-36 157.1 123 61.0
PGR042G2877 Punica granatum HOM05D001090 ORTHO05D002687 1.2e-36 157.1 123 64.2
Duzib093G1991 Durio zibethinus HOM05D001090 ORTHO05D002687 2.0e-36 156.4 129 62.8
AL1G34790 Arabidopsis lyrata HOM05D001090 ORTHO05D002687 3.4e-36 155.6 126 61.1
CARHR022000 Cardamine hirsuta HOM05D001090 ORTHO05D002687 3.4e-36 155.6 123 61.0
Oeu051970.1 Olea europaea HOM05D001090 ORTHO05D002687 3.4e-36 155.6 123 63.4
SalBow2G0524 Salvia bowleyana HOM05D001090 ORTHO05D002687 3.4e-36 155.6 123 58.5
Eucgr.F03833 Eucalyptus grandis HOM05D001090 ORTHO05D002687 5.8e-36 154.8 123 60.2
HanXRQChr09g0260691 Helianthus annuus HOM05D001090 ORTHO05D002687 5.8e-36 154.8 123 61.8
Sc10g0008070 Simmondsia chinensis HOM05D001090 ORTHO05D002687 5.8e-36 154.8 123 59.3
BraA08t34819Z Brassica rapa HOM05D001090 ORTHO05D002687 7.5e-36 154.5 123 62.6
Migut.N03263 Erythranthe guttata HOM05D001090 ORTHO05D002687 7.5e-36 154.5 123 56.9
Peaxi162Scf01003g00003 Petunia axillaris HOM05D001090 ORTHO05D002687 1.3e-35 153.7 129 58.1
SGA_v2.0_scaffold28G11973 Striga asiatica HOM05D001090 ORTHO05D002687 1.7e-35 153.3 123 61.0
Aqoxy6G00322 Aquilegia oxysepala HOM05D001090 ORTHO05D002687 2.2e-35 152.9 123 61.0
Nitab4.5_0001168g0030 Nicotiana tabacum HOM05D001090 ORTHO05D002687 6.4e-35 151.4 123 57.7
ClCG07G007660 Citrullus lanatus HOM05D001090 ORTHO05D002687 8.3e-35 151.0 122 57.4
Sed0013290 Sechium edule HOM05D001090 ORTHO05D002687 8.3e-35 151.0 122 57.4
Cc10_g12680 Coffea canephora HOM05D001090 ORTHO05D002687 1.1e-34 150.6 123 60.2
CsaV3_4G006230 Cucumis sativus L. HOM05D001090 ORTHO05D002687 1.1e-34 150.6 122 58.2
FvH4_2g27750 Fragaria vesca HOM05D001090 ORTHO05D002687 1.1e-34 150.6 123 59.3
FAN24G1236 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.1e-34 150.6 123 59.3
SGA_v2.0_scaffold81G26138 Striga asiatica HOM05D001090 ORTHO05D002687 1.4e-34 150.2 124 61.3
MELO3C016326.2 Cucumis melo HOM05D001090 ORTHO05D002687 2.4e-34 149.4 122 57.4
FAN15G0022 Fragaria x ananassa HOM05D001090 ORTHO05D002687 3.2e-34 149.1 123 58.5
PSO764G0256 Papaver somniferum HOM05D001090 ORTHO05D002687 3.2e-34 149.1 123 60.2
THA.LOC104812087 Tarenaya hassleriana HOM05D001090 ORTHO05D002687 5.4e-34 148.3 123 59.3
Hund17700 Selenicereus undatus HOM05D001090 ORTHO05D002687 9.2e-34 147.5 122 58.2
Hund26778 Selenicereus undatus HOM05D001090 ORTHO05D002687 9.2e-34 147.5 122 58.2
FAN20G0562 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.2e-33 147.1 123 57.7
PSO832G0312 Papaver somniferum HOM05D001090 ORTHO05D002687 1.2e-33 147.1 123 60.2
FAN27G1391 Fragaria x ananassa HOM05D001090 ORTHO05D002687 1.6e-33 146.7 123 57.7
AUR62007722 Chenopodium quinoa HOM05D001090 ORTHO05D002687 2.7e-33 146.0 123 61.0
AUR62013420 Chenopodium quinoa HOM05D001090 ORTHO05D002687 2.7e-33 146.0 123 59.3
EL10Ac1g01340 Beta vulgaris HOM05D001090 ORTHO05D002687 1.3e-32 143.7 123 58.5
PGSC0003DMG400006051 Solanum tuberosum HOM05D001090 ORTHO05D002687 1.7e-32 143.3 123 55.3
MSTRG.24175 Avicennia marina HOM05D001090 ORTHO05D002687 3.9e-32 142.1 123 55.3
Hma1.2p1_0014F.1_g010140 Hydrangea macrophylla HOM05D001090 ORTHO05D002687 6.6e-32 141.4 123 59.3
ATR0584G059 Amborella trichopoda HOM05D001090 ORTHO05D002687 3.3e-31 139.0 123 52.0
Solyc11g005020.3 Solanum lycopersicum HOM05D001090 ORTHO05D002687 4.3e-31 138.7 123 53.7
vmacro05516 Vaccinium macrocarpon HOM05D001090 ORTHO05D002687 4.3e-31 138.7 166 46.4
Nitab4.5_0002045g0110 Nicotiana tabacum HOM05D001090 ORTHO05D002687 8.1e-30 134.4 158 44.9
EL10Ac3g06526 Beta vulgaris HOM05D001090 ORTHO05D002687 4.0e-29 132.1 123 56.1
unitig_22.g6741 Utricularia gibba HOM05D001090 ORTHO05D002687 2.6e-28 129.4 123 53.7
Zm00001eb090990 Zea mays HOM05D001090 ORTHO05D002687 2.6e-28 129.4 122 53.3
Os11g0195100 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D002687 1.3e-27 127.1 122 49.2
HPP92_007345 Vanilla planifolia HOM05D001090 ORTHO05D002687 1.6e-25 120.2 123 51.2
Sopen11g001040 Solanum pennellii HOM05D001090 ORTHO05D002687 8.6e-24 114.4 105 51.4
CAN.G342.13 Capsicum annuum HOM05D001090 ORTHO05D002687 3.2e-18 95.9 92 50.0
Lj7C349G17 Lonicera japonica HOM05D001090 ORTHO05D002687 1.6e-14 83.6 77 53.2
Mapoly0073s0063 Marchantia polymorpha HOM05D001090 ORTHO05D002687 6.2e-14 81.6 132 35.6
CDE08G0798 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 2.4e-13 79.7 75 48.0
Hma1.2p1_1075F.1_g254480 Hydrangea macrophylla HOM05D001090 ORTHO05D002687 3.1e-13 79.3 48 77.1
AagrBONN_evm.TU.Sc2ySwM_362.1596 Anthoceros agrestis HOM05D001090 ORTHO05D002687 9.9e-12 74.3 133 33.8
SEGI_39736 Sequoiadendron giganteum HOM05D001090 ORTHO05D002687 4.2e-10 68.9 62 53.2
Pp3c27_7170 Physcomitrium patens HOM05D001090 ORTHO05D002687 2.7e-09 66.2 138 31.9
Lj7C347T10 Lonicera japonica HOM05D001090 ORTHO05D002687 8.7e-08 61.2 47 61.7
CBR_g50342 Chara braunii HOM05D001090 ORTHO05D002687 1.9e-07 60.1 86 37.2
SMO347G0291 Selaginella moellendorffii HOM05D001090 ORTHO05D002687 1.9e-07 60.1 84 33.3
SMO167G0049 Selaginella moellendorffii HOM05D001090 ORTHO05D002687 2.5e-07 59.7 91 33.0
SEGI_04791 Sequoiadendron giganteum HOM05D001090 ORTHO05D002687 4.3e-07 58.9 88 33.0


User provided reference genes

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