Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 8.5e-235 816.6 411 100.0
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 4.7e-201 704.5 407 88.5
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 8.1e-201 703.7 398 89.2
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.5e-194 682.9 411 82.7
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 6.2e-193 677.6 408 83.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 8.1e-193 677.2 372 89.5
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 6.8e-192 674.1 399 84.2
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.6e-191 672.2 412 81.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 7.8e-188 660.6 404 81.7
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 3.6e-185 651.7 400 81.0
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 9.9e-175 617.1 380 80.5
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 2.9e-174 615.5 416 75.0
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.9e-174 614.8 384 79.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.2e-173 611.7 400 77.5
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.2e-173 611.7 400 75.5
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.6e-172 609.8 380 80.0
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.7e-172 609.0 397 76.1
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.5e-172 608.6 395 76.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.5e-172 608.6 395 75.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.3e-171 606.7 384 77.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 6.7e-171 604.4 410 74.6
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.5e-170 603.2 417 74.1
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.9e-170 602.8 425 72.9
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.5e-170 602.4 392 76.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 7.4e-170 600.9 409 75.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.6e-170 600.5 364 79.4
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.3e-169 600.1 399 74.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.7e-169 598.6 386 76.9
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.0e-168 595.1 401 73.8
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 6.9e-168 594.3 389 77.1
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.5e-167 593.2 377 76.1
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 4.5e-167 591.7 392 74.7
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.3e-166 590.1 402 72.6
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 2.2e-166 589.3 357 80.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.5e-166 587.8 388 74.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.4e-165 586.6 372 77.2
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.9e-165 586.3 376 76.6
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 3.2e-165 585.5 371 77.1
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 2.1e-164 582.8 402 72.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.0e-163 580.5 426 69.5
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.8e-163 579.7 386 74.4
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 6.7e-163 577.8 410 71.0
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.1e-162 577.0 356 78.4
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.5e-162 576.6 382 74.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.3e-162 575.1 411 71.3
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 7.4e-162 574.3 396 73.5
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.8e-161 572.4 382 75.4
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 3.7e-161 572.0 372 74.5
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.8e-161 571.6 406 72.4
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 5.3e-160 568.2 383 74.2
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 6.9e-160 567.8 382 74.9
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.5e-159 566.6 381 74.3
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.0e-159 566.2 381 73.8
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 6.5e-158 561.2 357 77.0
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.2e-157 558.5 351 78.9
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 5.5e-157 558.1 412 69.7
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 9.3e-157 557.4 393 72.3
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 4.6e-156 555.1 387 71.1
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.9e-154 549.7 376 74.5
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.8e-153 545.8 351 79.2
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 6.3e-153 544.7 416 67.3
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.4e-152 542.7 368 70.9
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 3.1e-152 542.3 420 68.8
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 7.7e-151 537.7 370 71.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.2e-150 536.2 372 73.1
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.1e-149 533.9 356 74.4
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.2e-145 519.6 385 70.1
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 4.7e-140 501.9 373 66.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 2.3e-139 499.6 360 65.0
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.7e-137 493.4 399 64.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 9.4e-133 477.6 300 80.3
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 6.1e-132 474.9 349 66.2
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 6.1e-132 474.9 349 66.2
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.0e-131 472.6 375 66.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 7.0e-128 461.5 375 64.5
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.6e-122 443.0 381 60.6
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.2e-111 407.5 269 75.8
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.7e-111 406.4 263 76.0
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 5.9e-111 405.2 257 76.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 7.5e-106 388.3 351 57.5
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 7.0e-104 381.7 308 67.5
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 6.2e-92 342.0 274 63.1
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 6.8e-91 338.6 243 72.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.5e-87 326.2 231 70.1
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 8.4e-81 305.1 364 45.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.1e-80 304.7 174 83.3
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 7.6e-66 255.4 240 57.5
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.1e-62 242.7 145 82.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.9e-49 199.5 142 70.4
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 4.6e-47 193.0 124 74.2
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.4e-11 75.1 77 55.8


User provided reference genes

Program Settings