Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G080400 Glycine max HOM05D009101 ORTHO05D011226 3.4e-93 345.1 190 100.0
Phvul.009G220900 Phaseolus vulgaris HOM05D009101 ORTHO05D011226 5.4e-59 231.5 194 71.1
VMungo1309G0395 Vigna mungo HOM05D009101 ORTHO05D011226 5.1e-57 224.9 197 68.5
Glyma.15G185900 Glycine max HOM05D009101 ORTHO05D011226 2.5e-56 222.6 162 80.2
Medtr2g045060 Medicago truncatula HOM05D009101 ORTHO05D011226 5.3e-38 161.8 163 60.7
Psat1g017160 Pisum sativum HOM05D009101 ORTHO05D011226 8.7e-33 144.4 154 59.1
Lalb_Chr08g0232991 Lupinus albus HOM05D009101 ORTHO05D011226 8.2e-31 137.9 149 57.0
Nn4g25278 Nelumbo nucifera HOM05D009101 ORTHO05D011226 4.2e-27 125.6 146 53.4
Ca_02328_v3 Cicer arietinum L. HOM05D009101 ORTHO05D011226 9.3e-27 124.4 85 81.2
Cfa015746 Carpinus fangiana HOM05D009101 ORTHO05D011226 3.3e-24 115.9 107 61.7
MBI18_g39665_MAGBIO Magnolia biondii HOM05D009101 ORTHO05D011226 7.4e-24 114.8 121 57.0
CANSAT78G2401 Cannabis sativa HOM05D009101 ORTHO05D011226 4.8e-23 112.1 117 57.3
ATR0796G016 Amborella trichopoda HOM05D009101 ORTHO05D011226 1.8e-22 110.2 153 44.4
Dinv29494 Davidia involucrata HOM05D009101 ORTHO05D011226 4.1e-22 109.0 151 50.3
FAN12G1764 Fragaria x ananassa HOM05D009101 ORTHO05D011226 4.1e-22 109.0 134 49.3
CiPaw.01G127500 Carya illinoinensis HOM05D009101 ORTHO05D011226 9.0e-22 107.8 108 58.3
RcHm_v2.0_Chr4g0427961 Rosa chinensis HOM05D009101 ORTHO05D011226 2.0e-21 106.7 144 51.4
FvH4_4g21731 Fragaria vesca HOM05D009101 ORTHO05D011226 2.6e-21 106.3 164 45.1
Atru.chr4.3183 Acer truncatum HOM05D009101 ORTHO05D011226 3.4e-21 105.9 127 52.0
Potri.010G003700 Populus trichocarpa HOM05D009101 ORTHO05D011226 3.4e-21 105.9 89 65.2
PSO170G1471 Papaver somniferum HOM05D009101 ORTHO05D011226 4.5e-21 105.5 108 54.6
RcHm_v2.0_Chr4g0427931 Rosa chinensis HOM05D009101 ORTHO05D011226 5.9e-21 105.1 146 50.0
Ciclev10005889m.g Citrus clementina HOM05D009101 ORTHO05D011226 1.0e-20 104.4 94 66.0
PGR004G1430 Punica granatum HOM05D009101 ORTHO05D011226 1.0e-20 104.4 179 42.5
MD16G1133700 Malus domestica HOM05D009101 ORTHO05D011226 1.3e-20 104.0 127 51.2
GSVIVG01017702001 Vitis vinifera HOM05D009101 ORTHO05D011226 2.9e-20 102.8 114 54.4
Eucgr.H04137 Eucalyptus grandis HOM05D009101 ORTHO05D011226 1.1e-19 100.9 172 41.9
QL06p014659 Quercus lobata HOM05D009101 ORTHO05D011226 4.2e-19 99.0 112 50.9
Oeu002209.1 Olea europaea HOM05D009101 ORTHO05D011226 9.4e-19 97.8 100 54.0
Hma1.2p1_1067F.1_g253870 Hydrangea macrophylla HOM05D009101 ORTHO05D011226 3.0e-17 92.8 152 44.1
FAN07G2413 Fragaria x ananassa HOM05D009101 ORTHO05D011226 3.9e-17 92.4 180 40.0
Actinidia08061 Actinidia chinensis HOM05D009101 ORTHO05D011226 2.0e-16 90.1 113 48.7
Rhsim12G0024800 Rhododendron simsii HOM05D009101 ORTHO05D011226 4.8e-15 85.5 102 47.1
Os05g0137600 Oryza sativa ssp. japonica HOM05D009101 ORTHO05D011226 1.5e-13 80.5 129 43.4
MD13G1137900 Malus domestica HOM05D009101 ORTHO05D011226 5.9e-13 78.6 78 61.5
SEGI_22717 Sequoiadendron giganteum HOM05D009101 ORTHO05D011226 1.0e-09 67.8 69 47.8
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 6.3e-07 58.5 114 36.8
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 6.3e-07 58.5 114 36.8
Oeu007687.2 Olea europaea HOM05D002994 ORTHO05D003337 8.2e-07 58.2 131 33.6
THA.LOC104821131 Tarenaya hassleriana HOM05D002994 ORTHO05D003337 8.2e-07 58.2 86 39.5
Prupe.8G225000 Prunus persica HOM05D002994 ORTHO05D003337 1.1e-06 57.8 84 40.5
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 1.4e-06 57.4 81 39.5
AL1G18960 Arabidopsis lyrata HOM05D002994 ORTHO05D003337 1.8e-06 57.0 118 33.9
BcaB07g34096 Brassica carinata HOM05D002994 ORTHO05D003337 4.1e-06 55.8 126 28.6
ATR0561G058 Amborella trichopoda HOM05D002994 ORTHO05D003337 5.3e-06 55.5 63 46.0
Migut.F02068 Erythranthe guttata HOM05D002994 ORTHO05D003337 5.3e-06 55.5 132 34.1
C05p06630 Brassica napus HOM05D002994 ORTHO05D003337 7.0e-06 55.1 86 36.0
BolC5t29423H Brassica oleracea HOM05D002994 ORTHO05D003337 7.0e-06 55.1 86 36.0
BraA06t23760Z Brassica rapa HOM05D002994 ORTHO05D003337 7.0e-06 55.1 86 36.0
Duzib177G0745 Durio zibethinus HOM05D002994 ORTHO05D003337 7.0e-06 55.1 95 36.8
Lalb_Chr03g0024371 Lupinus albus HOM05D002994 ORTHO05D003337 7.0e-06 55.1 142 30.3
TAR633G1434 Trochodendron aralioides HOM05D002994 ORTHO05D003337 7.0e-06 55.1 86 37.2
A06p05520 Brassica napus HOM05D002994 ORTHO05D003337 9.1e-06 54.7 86 36.0
Rhsim02G0173800 Rhododendron simsii HOM05D002994 ORTHO05D003337 9.1e-06 54.7 68 39.7


User provided reference genes

Program Settings