Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 2.0e-180 635.6 307 100.0
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.9e-154 549.3 301 86.4
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.0e-152 541.6 307 83.7
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 3.7e-134 481.9 316 74.1
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.1e-125 453.8 322 73.0
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.0e-123 447.2 340 65.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 8.6e-123 444.1 317 71.3
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.5e-122 443.4 340 65.0
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.5e-122 443.4 341 64.5
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.9e-122 443.0 313 71.2
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 6.2e-121 438.0 338 65.1
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 6.2e-121 438.0 336 65.8
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.3e-120 436.0 338 64.2
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 4.9e-118 428.3 307 68.1
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 3.5e-116 422.2 338 63.0
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.3e-115 420.2 306 67.3
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 6.6e-115 417.9 339 61.7
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 4.3e-114 415.2 317 66.9
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.2e-113 413.7 338 62.4
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.8e-112 409.8 335 62.4
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.0e-111 406.4 305 66.6
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 3.8e-102 375.6 284 67.3
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.4e-101 373.6 288 62.8
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 5.4e-101 371.7 305 61.6
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 7.1e-101 371.3 282 64.9
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.2e-100 370.5 289 66.8
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-100 370.5 275 65.5
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 2.7e-100 369.4 282 66.3
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 4.6e-100 368.6 282 64.2
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 4.6e-100 368.6 230 75.7
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.0e-99 367.5 282 66.7
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.7e-99 366.7 286 64.7
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 1.7e-99 366.7 276 67.8
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 3.9e-99 365.5 234 73.5
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 3.9e-99 365.5 250 71.2
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 6.6e-99 364.8 218 80.3
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.6e-98 361.7 210 79.5
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.6e-98 361.7 210 79.5
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 5.6e-98 361.7 213 79.8
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.3e-98 361.3 210 79.0
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 7.3e-98 361.3 287 63.4
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 9.6e-98 360.9 213 78.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.3e-97 360.5 283 64.3
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 3.6e-97 359.0 211 80.1
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 3.6e-97 359.0 293 64.2
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.8e-97 358.6 283 65.0
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 6.2e-97 358.2 210 79.0
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.1e-96 357.5 318 59.1
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.4e-96 357.1 275 63.6
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 2.4e-96 356.3 314 60.5
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 5.3e-96 355.1 308 61.4
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 5.3e-96 355.1 290 64.8
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 6.9e-96 354.8 279 63.8
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 6.9e-96 354.8 311 60.5
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.5e-95 353.6 277 65.0
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.5e-95 353.6 274 65.3
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 2.0e-95 353.2 209 78.0
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.6e-95 352.8 213 76.5
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 7.6e-95 351.3 213 76.1
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 9.9e-95 350.9 213 76.5
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.3e-94 350.5 203 80.3
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.3e-94 350.5 203 80.3
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.3e-94 350.5 203 80.3
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 2.2e-94 349.7 219 75.8
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.9e-94 349.4 203 80.3
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 6.4e-94 348.2 273 63.4
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 8.4e-94 347.8 285 62.1
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 8.4e-94 347.8 318 58.8
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 8.4e-94 347.8 269 64.3
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 8.4e-94 347.8 292 62.0
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.1e-93 347.4 285 62.1
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 2.4e-93 346.3 297 60.6
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 3.2e-93 345.9 202 80.7
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 9.3e-93 344.4 273 63.0
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 1.2e-92 344.0 276 62.3
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 1.2e-92 344.0 279 62.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 1.6e-92 343.6 201 78.6
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 2.7e-92 342.8 289 60.2
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 2.7e-92 342.8 289 60.2
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 4.6e-92 342.0 213 74.2
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 4.6e-92 342.0 271 63.1
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 1.0e-91 340.9 201 80.1
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 1.3e-91 340.5 282 62.4
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.3e-91 340.5 287 59.9
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 2.3e-91 339.7 273 60.8
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 2.3e-91 339.7 287 60.3
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 3.0e-91 339.3 284 60.9
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 3.0e-91 339.3 281 61.2
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.9e-91 339.0 272 62.9
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.9e-91 339.0 214 74.3
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 5.1e-91 338.6 280 60.7
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 5.1e-91 338.6 280 60.7
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.1e-91 338.6 213 73.7
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 6.6e-91 338.2 290 61.7
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.1e-90 337.4 284 60.6
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.5e-90 337.0 283 61.5
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.9e-90 336.7 236 69.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.9e-90 336.7 210 74.8
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.6e-90 335.1 216 74.1
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.6e-89 333.6 192 80.2
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 2.1e-89 333.2 278 61.9
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 2.8e-89 332.8 270 60.7
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.6e-89 332.4 216 73.6
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.8e-89 332.0 205 76.1
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 4.8e-89 332.0 242 66.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 3.1e-88 329.3 203 75.9
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 9.0e-88 327.8 207 74.4
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 1.2e-87 327.4 220 70.5
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 1.5e-87 327.0 192 78.6
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.0e-87 326.6 205 73.7
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 7.1e-85 318.2 225 67.6
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.0e-83 314.3 287 54.4
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 6.7e-83 311.6 214 70.1
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.5e-82 310.5 210 67.1
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.6e-82 307.8 207 68.1
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 5.3e-80 302.0 282 58.2
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 2.0e-79 300.1 383 46.2
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 8.4e-78 294.7 163 83.4
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.6e-76 290.4 233 58.4
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 9.6e-74 281.2 201 61.2
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 5.9e-71 271.9 201 62.7
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 4.2e-69 265.8 185 67.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 6.7e-67 258.5 161 72.7
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.1e-64 251.1 267 52.1
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 3.1e-64 249.6 143 79.0
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 4.1e-64 249.2 138 85.5
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 5.3e-64 248.8 147 79.6
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.4e-61 240.7 148 73.6
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.0e-59 234.6 204 55.9
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 3.7e-49 199.5 121 73.6
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 1.1e-45 188.0 171 53.2
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 5.2e-43 179.1 146 61.0
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.5e-42 177.6 156 55.8
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 7.0e-32 142.1 117 57.3
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 2.3e-27 127.1 150 48.0
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.2e-26 124.8 86 64.0
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.9e-22 110.2 156 51.3
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.2e-19 99.4 59 81.4
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 7.5e-18 95.5 141 41.1
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.4e-16 89.4 120 46.7
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 5.4e-16 89.4 124 45.2
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 8.6e-14 82.0 51 80.4
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.0e-10 70.9 56 66.1
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 6.6e-06 55.8 33 69.7


User provided reference genes

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