Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 1.5e-115 419.5 207 100.0
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 3.1e-84 315.5 210 77.1
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.5e-62 243.4 210 62.4
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.2e-57 225.3 200 62.5
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 5.9e-43 178.3 222 50.0
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.2e-38 164.1 205 48.3
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 4.4e-38 162.2 214 45.3
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 2.9e-37 159.5 210 47.6
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 1.0e-34 151.0 190 49.5
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 9.2e-28 127.9 209 39.2
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.6e-27 125.6 213 40.8
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 1.0e-26 124.4 178 44.4
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.0e-26 124.4 206 38.8
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.7e-26 123.6 195 40.5
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.3e-26 123.2 213 40.4
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 3.0e-26 122.9 213 39.0
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 3.9e-26 122.5 190 44.2
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 5.1e-26 122.1 208 38.5
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.1e-25 120.9 179 42.5
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.1e-25 120.9 226 38.1
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 3.3e-25 119.4 199 37.2
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.2e-24 117.5 193 39.4
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.2e-24 117.5 182 37.9
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.6e-24 117.1 193 39.4
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.1e-24 116.7 189 39.7
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.8e-24 116.3 187 39.6
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.6e-24 115.9 187 38.0
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 6.2e-24 115.2 214 38.3
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.1e-23 114.4 205 38.0
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 3.1e-23 112.8 220 37.7
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.0e-23 112.5 193 37.8
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 5.2e-23 112.1 199 37.7
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.2e-22 110.9 193 37.8
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.2e-22 110.9 193 37.8
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.2e-22 110.9 190 36.3
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 2.6e-22 109.8 188 38.8
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 2.6e-22 109.8 191 37.7
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 3.4e-22 109.4 193 36.8
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 3.4e-22 109.4 193 36.8
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 4.4e-22 109.0 204 38.7
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 4.4e-22 109.0 203 36.9
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 5.8e-22 108.6 219 38.4
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 7.5e-22 108.2 194 39.2
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 9.9e-22 107.8 194 36.6
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 2.2e-21 106.7 198 37.4
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 2.9e-21 106.3 189 35.4
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 2.9e-21 106.3 197 35.0
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 3.7e-21 105.9 198 36.4
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 3.7e-21 105.9 188 39.4
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.4e-21 105.1 185 35.7
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 6.4e-21 105.1 193 36.3
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.1e-20 104.4 198 36.9
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.1e-20 104.4 196 37.2
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 1.4e-20 104.0 208 36.5
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.9e-20 103.6 201 36.3
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 3.2e-20 102.8 196 36.7
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 4.1e-20 102.4 195 39.0
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 5.4e-20 102.1 193 36.3
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 5.4e-20 102.1 193 36.3
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 9.2e-20 101.3 201 38.3
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.6e-19 100.5 204 38.7
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.6e-19 100.5 182 35.2
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 2.1e-19 100.1 195 36.9
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 2.1e-19 100.1 202 37.1
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 4.6e-19 99.0 202 34.7
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 6.0e-19 98.6 196 36.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 6.0e-19 98.6 196 36.2
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 6.0e-19 98.6 197 36.5
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 7.8e-19 98.2 196 34.2
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 7.8e-19 98.2 192 38.5
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.0e-18 97.8 214 35.5
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.0e-18 97.8 198 35.9
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.3e-18 96.7 202 34.7
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 2.3e-18 96.7 183 35.5
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.0e-18 96.3 203 34.5
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.0e-18 96.3 202 34.7
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 3.0e-18 96.3 188 37.8
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 3.9e-18 95.9 203 34.5
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 6.6e-18 95.1 212 34.4
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 8.6e-18 94.7 196 38.3
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 1.1e-17 94.4 196 33.2
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.1e-17 94.4 202 34.7
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.9e-17 93.6 191 36.6
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 1.9e-17 93.6 186 34.4
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 2.5e-17 93.2 201 36.8
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 3.3e-17 92.8 179 37.4
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.3e-17 92.4 180 35.0
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.3e-17 92.4 216 32.4
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 9.5e-17 91.3 205 35.1
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.2e-16 90.9 215 30.7
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.2e-16 90.9 187 35.3
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.6e-16 89.4 203 36.5
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.7e-16 89.0 187 35.8
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 8.1e-16 88.2 202 34.7
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.1e-16 88.2 202 34.7
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 1.4e-15 87.4 194 38.1
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.8e-15 87.0 217 28.1
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.1e-15 86.3 194 34.0
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 4.0e-15 85.9 204 33.8
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 4.0e-15 85.9 197 33.0
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 8.9e-15 84.7 193 33.2
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.5e-14 84.0 194 33.0
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 2.2e-13 80.1 220 31.8
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 3.8e-13 79.3 202 34.2
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.9e-13 79.0 212 32.5
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 6.4e-13 78.6 212 31.6
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 8.4e-13 78.2 206 30.6
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 8.4e-13 78.2 208 30.8
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.1e-12 77.8 203 30.0
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.1e-12 77.8 196 33.2
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.4e-12 77.4 215 30.7
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.9e-12 77.0 178 32.6
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 9.2e-12 74.7 124 41.1
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.2e-11 74.3 195 32.3
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 2.7e-11 73.2 196 32.7
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 4.6e-11 72.4 193 27.5
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.3e-09 66.2 188 30.3
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 4.3e-09 65.9 189 31.7
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 9.6e-09 64.7 187 29.9
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.2e-08 64.3 209 27.8
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 2.8e-08 63.2 182 30.2
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.6e-08 62.8 204 29.4
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 3.1e-07 59.7 43 62.8
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 6.9e-07 58.5 92 40.2
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.0e-06 57.0 43 55.8


User provided reference genes

Program Settings