Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.1e-212 743.0 387 100.0
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 4.0e-186 654.8 346 96.0
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.6e-174 616.3 351 89.2
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.1e-170 601.7 352 87.2
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 7.7e-169 597.4 350 86.6
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 8.5e-168 594.0 346 86.7
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.1e-166 589.3 342 85.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.1e-166 587.8 349 85.7
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-163 579.3 347 84.7
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 3.4e-161 572.0 345 82.9
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.4e-161 572.0 356 82.0
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 5.9e-161 571.2 345 83.2
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 7.7e-161 570.9 360 81.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.5e-159 565.8 357 81.2
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.2e-159 564.3 360 80.3
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-158 563.5 351 81.2
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 7.0e-154 547.7 347 80.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.5e-153 545.0 350 78.6
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 5.9e-153 544.7 362 76.0
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.7e-152 543.1 353 77.9
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.8e-152 542.0 357 76.5
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 6.5e-152 541.2 344 77.6
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.5e-152 541.2 353 77.1
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 8.5e-152 540.8 355 76.3
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.5e-152 540.8 366 76.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.5e-151 539.3 366 76.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.2e-151 538.5 364 73.6
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.5e-151 538.1 366 75.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.7e-150 535.8 364 75.0
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.7e-150 535.8 349 76.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.6e-150 535.4 368 74.5
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 6.1e-150 534.6 325 80.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.0e-149 533.9 364 74.2
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.0e-149 533.9 366 75.4
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 2.3e-149 532.7 366 74.0
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.0e-149 532.3 343 77.0
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 4.0e-149 531.9 363 73.6
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.0e-149 531.9 355 76.1
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 5.2e-149 531.6 363 73.8
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 2.6e-148 529.3 367 75.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.6e-148 529.3 352 75.3
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 3.3e-148 528.9 315 82.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.4e-148 528.5 336 78.0
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.4e-148 528.5 337 76.9
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 7.5e-148 527.7 351 75.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 7.5e-148 527.7 360 73.9
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 9.7e-148 527.3 365 73.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.3e-147 526.9 363 72.7
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.3e-147 526.9 366 71.6
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.7e-147 526.6 355 74.1
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.2e-147 526.2 364 75.0
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.2e-147 526.2 355 75.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.2e-147 526.2 355 74.4
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.2e-147 526.2 364 73.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.8e-147 525.8 310 81.6
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.8e-147 525.8 355 74.1
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.7e-147 525.4 364 74.7
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 3.7e-147 525.4 363 74.1
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 4.8e-147 525.0 372 71.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 6.3e-147 524.6 349 74.8
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.1e-146 523.9 307 81.8
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.1e-146 523.9 347 77.2
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.4e-146 523.5 340 76.5
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-146 523.1 364 74.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.8e-146 523.1 368 72.0
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.1e-146 522.3 357 76.5
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.1e-146 522.3 353 75.1
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 7.0e-146 521.2 355 73.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 9.1e-146 520.8 355 73.5
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.2e-145 520.4 367 71.4
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.6e-145 520.0 361 74.0
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.6e-145 520.0 351 74.9
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 2.0e-145 519.6 349 74.5
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.7e-145 519.2 310 80.3
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.5e-145 518.5 363 73.0
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.5e-145 518.5 363 73.0
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.5e-145 518.5 366 72.1
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 7.7e-145 517.7 368 72.3
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 7.7e-145 517.7 377 70.8
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.3e-144 516.9 365 72.9
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-144 516.5 367 73.0
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.7e-144 516.5 368 73.6
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 2.2e-144 516.2 364 72.5
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 2.2e-144 516.2 364 72.5
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.9e-144 515.8 365 72.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.8e-144 515.4 365 72.6
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 3.8e-144 515.4 362 72.9
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.8e-144 515.4 367 71.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.5e-144 514.6 333 76.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 8.5e-144 514.2 361 72.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-143 513.8 365 72.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.1e-143 513.8 365 72.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.1e-143 513.8 347 74.6
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-143 513.8 333 76.0
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.5e-143 513.5 350 73.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.5e-143 512.7 357 71.7
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.2e-143 512.3 365 72.6
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.2e-143 512.3 351 72.9
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 5.5e-143 511.5 394 67.3
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.2e-142 510.4 362 71.0
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.6e-142 510.0 361 70.6
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.7e-142 509.2 333 75.7
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.7e-142 508.4 333 75.7
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.7e-142 508.4 333 75.7
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.7e-142 508.4 333 75.4
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.1e-142 508.1 364 70.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 6.1e-142 508.1 361 71.7
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 8.0e-142 507.7 328 77.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.4e-141 506.9 328 75.0
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.8e-141 506.5 357 68.9
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.3e-141 506.1 310 78.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.3e-141 506.1 333 75.1
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.0e-141 505.8 332 78.0
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-140 503.4 324 76.5
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 2.6e-140 502.7 299 81.6
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 3.4e-140 502.3 312 81.1
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 7.5e-140 501.1 355 71.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.1e-138 495.7 361 68.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 8.6e-136 487.6 453 58.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.6e-136 487.6 309 76.1
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.3e-135 485.7 356 70.8
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.2e-135 485.3 351 70.1
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 4.5e-129 465.3 357 67.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.1e-127 460.7 311 72.7
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.3e-127 458.8 364 66.2
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.3e-127 458.0 301 78.1
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 7.3e-127 458.0 271 81.5
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 4.0e-125 452.2 384 63.3
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 9.8e-124 447.6 344 68.9
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 1.3e-123 447.2 407 61.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.7e-123 446.8 369 65.9
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 2.4e-122 443.0 309 73.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 3.2e-122 442.6 288 75.0
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.7e-121 439.5 318 64.5
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 6.0e-121 438.3 294 74.8
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 3.0e-120 436.0 326 64.1
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.3e-119 432.6 312 65.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.6e-119 431.8 356 64.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.6e-118 430.3 251 82.5
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 5.8e-116 421.8 310 63.2
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.3e-115 420.6 309 63.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.4e-114 416.4 366 63.7
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 5.6e-111 405.2 353 60.1
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 5.6e-111 405.2 320 61.9
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-107 392.9 310 61.9
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.5e-105 386.0 221 85.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 4.6e-105 385.6 337 59.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.2e-100 370.9 364 56.0
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.7e-96 357.1 230 76.5
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 4.2e-90 335.9 300 55.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.8e-85 320.5 221 67.4
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 8.1e-78 295.0 244 65.2
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.0e-64 251.5 368 45.1
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 8.2e-62 241.9 150 76.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.1e-53 213.4 171 59.6
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 4.2e-50 203.0 170 64.7
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-44 184.9 174 58.6
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.3e-30 138.3 96 70.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.5e-28 129.8 100 67.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.9e-26 124.4 281 32.4
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 4.4e-23 113.2 335 29.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.1e-21 108.6 325 27.4
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.1e-21 108.6 65 80.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 9.1e-21 105.5 243 35.0
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 4.7e-17 93.2 429 24.9
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-15 88.6 59 71.2
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.6e-15 87.4 62 71.0
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 3.4e-15 87.0 68 63.2
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 3.4e-15 87.0 68 63.2
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 7.5e-15 85.9 68 63.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 8.6e-11 72.4 90 48.9
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.6e-09 68.2 108 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 2.8e-09 67.4 33 90.9
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.0e-08 65.5 81 46.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.2e-07 62.0 39 74.4
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.2e-07 62.0 39 74.4
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.0e-07 61.2 39 71.8
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 9.8e-07 58.9 35 77.1


User provided reference genes

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