Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 5.8e-87 324.3 178 100.0
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 8.6e-83 310.5 178 93.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.7e-76 288.9 179 88.8
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 3.0e-75 285.4 178 83.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.6e-75 284.3 178 84.3
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 7.3e-74 280.8 176 83.5
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 6.2e-73 277.7 176 81.8
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.8e-72 276.2 161 86.3
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.5e-71 273.1 161 84.5
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 2.0e-71 272.7 161 85.1
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.0e-71 272.7 160 86.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.0e-71 272.7 161 84.5
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 5.8e-71 271.2 161 84.5
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 7.6e-71 270.8 161 85.7
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 9.9e-71 270.4 161 84.5
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.3e-70 270.0 162 85.2
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.3e-70 270.0 162 84.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.3e-70 270.0 155 87.7
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.3e-70 270.0 162 85.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.7e-70 269.6 162 84.0
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 4.9e-70 268.1 161 83.2
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 4.9e-70 268.1 161 83.2
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 6.4e-70 267.7 158 86.1
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 6.4e-70 267.7 155 87.1
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.4e-70 267.7 161 83.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 8.4e-70 267.3 161 82.0
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.1e-69 266.9 161 83.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.9e-69 266.2 161 82.0
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.9e-69 266.2 161 82.0
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.9e-69 266.2 161 82.0
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.9e-69 266.2 178 76.4
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 2.4e-69 265.8 159 83.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 5.4e-69 264.6 151 89.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 5.4e-69 264.6 161 85.7
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 7.1e-69 264.2 161 81.4
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 7.1e-69 264.2 161 81.4
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.1e-69 264.2 161 83.2
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 7.1e-69 264.2 157 83.4
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.1e-69 264.2 161 81.4
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.1e-68 262.7 160 83.8
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 2.1e-68 262.7 160 83.8
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 2.7e-68 262.3 158 84.2
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.6e-68 261.5 161 80.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 4.6e-68 261.5 161 82.0
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 6.0e-68 261.2 156 84.0
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.0e-68 261.2 160 85.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.0e-68 261.2 177 78.5
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 6.0e-68 261.2 161 82.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 7.8e-68 260.8 158 81.6
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 161 82.0
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.0e-67 260.4 156 86.5
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.0e-67 260.4 176 77.8
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 161 82.6
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.0e-67 260.4 161 82.6
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.7e-67 259.6 160 84.4
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.7e-67 259.6 154 83.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.7e-67 259.6 154 86.4
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 2.3e-67 259.2 154 84.4
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.0e-67 258.8 160 83.1
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.9e-67 258.5 158 82.9
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 3.9e-67 258.5 161 83.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 5.1e-67 258.1 161 84.5
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 5.1e-67 258.1 161 82.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.1e-66 256.9 161 82.0
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.5e-66 256.5 178 74.2
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.9e-66 256.1 158 81.0
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.9e-66 256.1 161 80.1
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.5e-66 255.8 160 81.9
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 4.3e-66 255.0 169 80.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.3e-66 255.0 161 79.5
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.6e-66 254.6 161 80.1
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 5.6e-66 254.6 182 73.6
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.3e-66 254.2 161 80.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.3e-66 254.2 161 80.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 7.3e-66 254.2 166 78.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 7.3e-66 254.2 166 78.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 7.3e-66 254.2 166 78.3
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 9.6e-66 253.8 176 76.1
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.1e-65 252.7 161 79.5
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.1e-65 252.7 161 79.5
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.8e-65 252.3 153 83.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.2e-65 251.1 161 79.5
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.2e-65 251.1 151 83.4
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.1e-64 250.4 153 81.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.4e-64 250.0 161 83.2
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 9.0e-64 247.3 153 81.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 9.0e-64 247.3 154 80.5
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-63 246.9 161 77.0
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 2.6e-63 245.7 158 77.8
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 4.4e-63 245.0 158 75.9
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 7.6e-63 244.2 147 82.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.2e-62 242.7 147 82.3
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.9e-62 242.3 153 80.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.8e-62 241.9 153 81.0
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.9e-62 241.5 161 75.2
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 4.2e-61 238.4 148 78.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.5e-60 235.3 175 70.3
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 6.0e-60 234.6 142 80.3
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.6e-59 231.1 147 78.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.5e-58 229.2 153 76.5
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 3.3e-58 228.8 153 75.2
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.3e-58 228.4 139 80.6
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 5.6e-58 228.0 177 67.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 2.1e-57 226.1 153 73.9
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.8e-57 225.7 138 84.1
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.5e-55 218.4 137 78.1
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 5.8e-55 218.0 144 75.7
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 5.4e-53 211.5 152 71.1
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 9.3e-53 210.7 134 77.6
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.9e-50 203.0 131 77.1
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 4.3e-50 201.8 118 86.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 7.4e-50 201.1 116 89.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.7e-49 198.7 160 65.6
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 8.1e-49 197.6 153 62.7
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.5e-47 193.4 120 82.5
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 5.8e-47 191.4 154 63.0
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 3.2e-45 185.7 107 86.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 9.3e-45 184.1 119 79.8
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.6e-44 183.3 106 86.8
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 4.6e-44 181.8 107 85.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.6e-42 174.1 129 72.1
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.3e-41 173.7 152 57.2
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.1e-41 172.9 131 63.4
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.2e-33 146.4 91 82.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 2.7e-28 129.4 123 50.4
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.1e-16 90.9 106 53.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.7e-09 67.0 116 45.7


User provided reference genes

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