Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 3.6e-129 464.9 235 100.0
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 6.4e-126 454.1 235 97.0
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 6.2e-113 411.0 235 87.7
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 5.8e-111 404.4 237 84.8
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.6e-105 386.3 227 82.4
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.1e-101 373.6 229 79.5
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.2e-101 371.7 225 79.6
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 5.1e-99 364.8 231 78.8
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 5.1e-99 364.8 227 80.6
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 2.5e-98 362.5 228 77.2
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 3.3e-98 362.1 235 75.7
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 1.4e-96 356.7 232 75.4
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 4.9e-94 348.2 230 74.3
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.4e-93 345.9 230 72.2
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 5.4e-93 344.7 226 73.0
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 7.1e-93 344.4 234 72.6
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 7.1e-93 344.4 226 74.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 1.6e-92 343.2 230 71.3
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 3.9e-91 338.6 226 71.7
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 6.6e-91 337.8 226 71.7
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.1e-90 337.0 230 70.0
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.5e-90 336.7 228 71.1
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.5e-90 336.7 226 70.8
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 1.9e-90 336.3 212 75.9
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 3.3e-90 335.5 230 70.9
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.3e-90 335.1 230 70.0
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 5.6e-90 334.7 224 71.4
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 5.6e-90 334.7 245 69.4
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 7.4e-90 334.3 225 70.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 9.6e-90 334.0 230 70.9
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.1e-89 332.8 230 70.0
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.8e-89 332.4 226 72.6
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.8e-89 332.4 230 70.4
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 3.6e-89 332.0 227 71.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.1e-88 330.5 223 69.5
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.8e-88 329.7 236 69.1
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 2.4e-88 329.3 230 68.7
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 3.1e-88 328.9 230 69.1
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 6.9e-88 327.8 234 69.2
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 1.5e-87 326.6 234 68.8
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.6e-87 325.9 232 68.5
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.6e-87 325.9 226 73.0
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.5e-87 325.1 225 69.8
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 7.6e-87 324.3 225 69.8
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 9.9e-87 323.9 213 72.8
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.2e-86 322.8 223 70.9
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 2.2e-86 322.8 234 68.8
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.9e-86 322.4 229 70.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 8.4e-86 320.9 235 68.9
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 3.2e-85 318.9 226 71.2
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 4.2e-85 318.5 222 69.4
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 5.5e-85 318.2 234 67.1
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.3e-85 317.4 234 67.1
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.2e-84 317.0 234 67.1
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.1e-84 316.2 233 65.7
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 2.1e-84 316.2 221 71.0
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 6.0e-84 314.7 221 69.7
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.3e-83 312.8 234 66.7
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 6.7e-83 311.2 230 68.3
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 8.7e-83 310.8 234 66.2
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 8.7e-83 310.8 228 66.2
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.1e-82 310.5 230 66.1
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.1e-82 310.5 227 66.1
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.1e-82 310.5 212 70.3
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.3e-82 308.5 230 65.7
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 2.1e-81 306.2 235 65.1
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 8.1e-81 304.3 232 64.7
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 2.4e-80 302.8 232 63.4
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.2e-79 300.4 232 63.4
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.2e-79 300.4 232 63.4
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.5e-79 300.1 231 63.6
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 4.5e-79 298.5 232 62.5
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 5.8e-79 298.1 232 62.5
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 7.6e-79 297.7 232 62.1
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 2.9e-78 295.8 230 62.2
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 3.8e-78 295.4 231 61.9
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.9e-77 293.1 238 61.8
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 9.3e-77 290.8 231 61.0
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.2e-76 290.4 232 60.8
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 1.2e-76 290.4 236 61.4
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 7.9e-76 287.7 229 63.8
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 3.0e-75 285.8 233 60.1
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.0e-75 285.8 213 65.3
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 6.7e-75 284.6 232 59.9
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 6.7e-75 284.6 234 60.7
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.9e-74 283.1 213 66.2
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 4.3e-74 282.0 216 59.7
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 4.3e-74 282.0 222 62.2
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.3e-73 280.4 235 58.7
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 3.4e-71 272.3 234 59.8
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 2.1e-68 263.1 207 59.4
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 6.1e-68 261.5 218 58.7
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.5e-66 256.1 227 58.6
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 6.3e-65 251.5 254 50.8
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 1.4e-61 240.4 151 78.8
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 8.8e-59 231.1 203 60.6
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 8.2e-57 224.6 151 72.8
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.8e-56 223.4 148 70.9
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 4.5e-55 218.8 226 50.0
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.1e-44 183.3 211 40.8
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.5e-42 177.2 225 48.0
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 2.6e-42 176.4 137 62.8
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 2.8e-41 172.9 228 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 6.3e-41 171.8 226 40.3
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 8.2e-41 171.4 118 72.9
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.9e-37 160.2 152 53.3
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 5.5e-37 158.7 230 36.5
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 4.0e-35 152.5 217 35.9
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.7e-31 139.8 89 75.3
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 3.5e-31 139.4 158 48.1
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 4.5e-31 139.0 218 32.1
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 1.8e-27 127.1 109 57.8
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.1e-20 103.6 72 63.9
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 5.2e-11 72.4 88 48.9
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 5.2e-11 72.4 88 48.9
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 4.1e-08 62.8 43 62.8
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 1.2e-07 61.2 37 73.0


User provided reference genes

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