Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 4.1e-63 244.6 127 100.0
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 1.1e-47 193.4 114 92.1
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.2e-46 189.9 114 90.4
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 1.3e-45 186.4 114 88.6
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.9e-45 184.9 106 90.6
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 5.1e-45 184.5 114 86.0
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 6.6e-45 184.1 114 87.7
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 8.7e-45 183.7 114 87.7
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 3.3e-44 181.8 114 86.0
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 4.3e-44 181.4 109 89.9
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 7.3e-44 180.6 111 86.5
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.3e-43 179.9 109 89.0
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 2.1e-43 179.1 114 86.0
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.1e-42 176.8 114 83.3
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.4e-42 175.6 111 84.7
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.7e-38 162.2 111 73.9
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 4.6e-38 161.4 111 73.0
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 1.3e-37 159.8 107 73.8
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.3e-37 159.8 114 73.7
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 2.3e-37 159.1 105 76.2
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 3.9e-37 158.3 114 78.1
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 6.7e-37 157.5 114 71.1
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 6.7e-37 157.5 104 75.0
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 8.7e-37 157.1 114 74.6
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.5e-36 156.4 105 74.3
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 4.3e-36 154.8 105 73.3
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 5.6e-36 154.5 114 72.8
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 7.4e-36 154.1 114 72.8
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.3e-35 153.3 118 66.9
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.3e-35 153.3 114 70.2
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.3e-35 153.3 99 74.7
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.1e-35 152.5 114 68.4
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 6.2e-35 151.0 114 66.7
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 6.2e-35 151.0 114 68.4
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 3.1e-34 148.7 114 70.2
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 5.3e-34 147.9 114 69.3
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 6.9e-34 147.5 114 67.5
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.0e-34 147.1 114 66.7
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.0e-34 147.1 114 66.7
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.2e-33 146.7 104 71.2
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.5e-33 146.4 105 72.4
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.0e-33 146.0 114 70.2
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.0e-33 146.0 114 66.7
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.6e-33 145.6 114 65.8
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 2.6e-33 145.6 114 65.8
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.5e-33 144.8 114 65.8
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 4.5e-33 144.8 114 63.2
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 4.5e-33 144.8 114 65.8
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 4.5e-33 144.8 118 65.3
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 5.8e-33 144.4 114 65.8
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.8e-33 144.4 114 64.9
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 7.6e-33 144.1 114 63.2
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 9.9e-33 143.7 114 65.8
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.7e-32 142.9 114 64.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.7e-32 142.9 105 72.4
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.7e-32 142.9 114 64.9
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.7e-32 142.9 114 65.8
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 2.2e-32 142.5 98 72.4
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.2e-32 142.5 108 69.4
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 2.9e-32 142.1 114 68.4
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 2.9e-32 142.1 114 65.8
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.8e-32 141.7 114 62.3
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.8e-32 141.7 105 66.7
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 3.8e-32 141.7 114 66.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 8.4e-32 140.6 114 65.8
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 8.4e-32 140.6 99 70.7
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.4e-31 139.8 114 63.2
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.4e-31 139.8 81 80.2
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.4e-31 139.8 106 67.9
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.9e-31 139.4 104 67.3
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.4e-31 139.0 126 57.1
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 3.2e-31 138.7 114 63.2
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 3.2e-31 138.7 114 62.3
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 3.2e-31 138.7 105 71.4
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 3.2e-31 138.7 114 61.4
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.2e-31 138.7 114 64.9
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 7.1e-31 137.5 108 66.7
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 9.3e-31 137.1 106 65.1
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.2e-30 136.7 105 64.8
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.1e-30 136.0 118 60.2
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.1e-30 136.0 103 65.0
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 2.1e-30 136.0 87 74.7
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.1e-30 136.0 105 61.0
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 2.7e-30 135.6 104 72.1
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.7e-30 135.6 105 69.5
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 3.5e-30 135.2 114 63.2
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 3.5e-30 135.2 99 71.7
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 3.5e-30 135.2 105 68.6
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.3e-29 133.3 106 65.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.3e-29 133.3 139 54.7
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 2.3e-29 132.5 115 61.7
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 3.9e-29 131.7 108 63.9
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 6.7e-29 131.0 114 60.5
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.7e-29 131.0 107 64.5
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 8.7e-29 130.6 106 65.1
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 8.7e-29 130.6 106 64.2
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.1e-28 130.2 92 71.7
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.1e-28 130.2 115 64.3
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.5e-28 129.8 136 55.1
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.5e-28 129.8 118 58.5
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 4.3e-28 128.3 111 64.9
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 4.3e-28 128.3 106 64.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 7.4e-28 127.5 106 63.2
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 7.4e-28 127.5 106 64.2
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 9.6e-28 127.1 111 61.3
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 9.6e-28 127.1 111 61.3
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 1.3e-27 126.7 110 61.8
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.3e-27 126.7 110 61.8
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 1.3e-27 126.7 114 62.3
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.6e-27 126.3 106 63.2
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.1e-27 125.9 106 63.2
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 3.7e-27 125.2 106 63.2
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 4.8e-27 124.8 106 62.3
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 8.2e-27 124.0 107 64.5
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 8.2e-27 124.0 104 60.6
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.8e-26 122.9 107 63.6
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.8e-26 122.9 111 57.7
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 2.6e-25 119.0 113 62.8
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.5e-25 118.2 86 69.8
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 6.5e-24 114.4 66 80.3
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 8.4e-24 114.0 82 70.7
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 1.9e-23 112.8 96 60.4
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.9e-23 112.8 89 65.2
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 5.5e-23 111.3 112 52.7
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 1.6e-22 109.8 99 54.5
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 6.7e-21 104.4 104 51.0
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 9.7e-20 100.5 71 67.6
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.6e-19 99.8 93 54.8
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 3.1e-18 95.5 102 52.0
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.0e-18 94.0 62 77.4
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 4.2e-15 85.1 84 52.4
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 5.5e-15 84.7 81 60.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-14 83.6 68 66.2
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 2.7e-14 82.4 104 44.2
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.0e-13 80.5 86 52.3
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.8e-10 69.7 51 62.7
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 1.0e-08 63.9 91 40.7


User provided reference genes

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