Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 1.0e-55 220.3 157 100.0
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.7e-42 176.4 163 79.1
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.0e-38 162.9 161 61.5
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-28 130.6 125 65.6
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 1.9e-17 93.2 126 51.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 9.5e-17 90.9 141 42.6
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 6.1e-16 88.2 187 49.2
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.8e-15 86.7 158 40.5
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 4.0e-15 85.5 158 38.6
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 6.8e-15 84.7 158 38.6
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 6.8e-15 84.7 159 45.3
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 3.4e-14 82.4 153 34.0
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 5.7e-14 81.6 137 52.6
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 9.8e-14 80.9 177 48.0
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 6.3e-13 78.2 149 40.3
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 8.3e-13 77.8 161 37.9
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.8e-12 76.6 152 36.8
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 5.4e-12 75.1 153 37.3
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.2e-11 73.9 143 37.1
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 1.6e-11 73.6 125 48.8
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 5.6e-09 65.1 113 50.4
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 5.6e-09 65.1 130 42.3
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.6e-09 65.1 130 37.7
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 9.5e-09 64.3 166 33.7
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.2e-08 63.9 125 36.0
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.2e-08 63.9 140 30.0
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.8e-08 62.8 119 39.5
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.8e-08 62.8 122 32.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 4.7e-08 62.0 123 34.1
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.4e-07 60.5 146 32.9
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.4e-07 60.5 129 30.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.3e-07 59.7 114 41.2
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.0e-07 58.9 133 34.6
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 5.2e-07 58.5 133 34.6
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.2e-07 58.5 144 35.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 5.2e-07 58.5 127 29.9
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 8.9e-07 57.8 128 39.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.9e-07 57.8 144 35.4
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.2e-06 57.4 163 31.9
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-06 57.0 133 33.8
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.5e-06 57.0 141 33.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.5e-06 57.0 117 35.9
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.0e-06 56.6 118 34.7
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.6e-06 56.2 153 35.9
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.6e-06 56.2 128 32.0
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.6e-06 56.2 138 31.9
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.6e-06 56.2 124 33.1
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 3.4e-06 55.8 127 29.9
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.4e-06 55.5 119 37.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 7.5e-06 54.7 132 31.8
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 9.8e-06 54.3 124 36.3
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 9.8e-06 54.3 122 31.1


User provided reference genes

Program Settings