Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 4.1e-183 644.8 382 100.0
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 2.7e-150 535.8 382 78.0
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 1.6e-139 500.0 383 74.4
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 6.3e-123 444.9 386 67.6
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 5.2e-101 372.1 376 61.2
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 3.7e-91 339.3 392 55.9
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 3.0e-85 319.7 400 52.8
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 4.4e-84 315.8 400 51.8
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 1.3e-83 314.3 374 55.3
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 1.2e-78 297.7 387 51.9
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.3e-56 223.8 384 41.4
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.3e-56 223.8 384 41.4
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 3.0e-56 223.4 387 43.9
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 2.7e-49 200.3 412 37.9
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 7.1e-42 175.6 409 36.4
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 1.1e-34 151.8 419 34.1
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 1.4e-34 151.4 411 31.9
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 2.4e-34 150.6 388 34.3
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 8.4e-27 125.6 381 30.4
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 7.1e-26 122.5 391 31.2
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.1e-21 108.6 402 30.3
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 2.6e-20 104.0 364 28.3
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 1.4e-18 98.2 405 27.7
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 1.1e-15 88.6 380 27.6
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 1.5e-15 88.2 388 27.6
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 1.7e-11 74.7 145 35.9
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 1.1e-10 72.0 215 34.4
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 1.9e-10 71.2 429 24.5
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 4.6e-09 66.6 435 25.3
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 4.3e-07 60.1 90 43.3
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 7.4e-07 59.3 379 22.7
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 9.7e-07 58.9 388 25.3
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 1.7e-06 58.2 70 41.4
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 3.7e-06 57.0 61 49.2


User provided reference genes

Program Settings