Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 5.0e-51 204.1 103 100.0
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 5.0e-43 177.6 101 86.1
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.5e-42 175.3 103 84.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.3e-42 174.9 103 84.5
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.2e-41 172.9 103 81.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.2e-41 172.9 103 81.6
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 6.2e-41 170.6 101 82.2
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.4e-40 169.5 103 82.5
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.0e-39 165.6 103 80.6
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.6e-39 165.2 103 80.6
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.1e-37 159.8 103 75.7
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.1e-37 159.8 102 77.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.4e-37 157.5 102 75.5
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.7e-36 155.2 102 77.5
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 2.7e-36 155.2 103 76.7
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.7e-36 155.2 100 78.0
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 6.0e-36 154.1 103 74.8
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 6.0e-36 154.1 103 73.8
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.0e-35 153.3 103 73.8
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.7e-35 152.5 103 73.8
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.3e-35 152.1 103 74.8
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 2.3e-35 152.1 103 74.8
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 6.6e-35 150.6 97 76.3
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 6.6e-35 150.6 102 73.5
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.1e-34 149.8 100 73.0
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.5e-34 149.4 102 70.6
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.5e-34 149.4 103 70.9
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.9e-34 149.1 101 72.3
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.5e-34 148.7 103 70.9
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 4.3e-34 147.9 103 69.9
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 4.3e-34 147.9 102 72.5
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 4.3e-34 147.9 102 71.6
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 5.6e-34 147.5 100 74.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 5.6e-34 147.5 103 71.8
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 7.3e-34 147.1 89 79.8
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 9.5e-34 146.7 102 70.6
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.6e-33 146.0 102 70.6
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-33 145.2 102 69.6
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.8e-33 145.2 101 70.3
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 3.6e-33 144.8 102 71.6
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 4.7e-33 144.4 101 71.3
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.2e-33 144.1 102 71.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.1e-32 143.3 103 71.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.1e-32 143.3 100 69.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.4e-32 142.9 103 68.9
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.4e-32 142.9 103 68.0
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.4e-32 142.9 100 69.0
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.8e-32 142.5 102 69.6
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 2.3e-32 142.1 102 70.6
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 5.2e-32 141.0 97 70.1
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 5.2e-32 141.0 97 70.1
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.8e-32 140.6 102 68.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 8.9e-32 140.2 102 67.6
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 8.9e-32 140.2 102 67.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 8.9e-32 140.2 102 67.6
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.2e-31 139.8 102 67.6
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.5e-31 139.4 102 69.6
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.5e-31 139.4 97 69.1
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 2.6e-31 138.7 97 73.2
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 2.6e-31 138.7 100 68.0
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.4e-31 138.3 102 68.6
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.4e-31 138.3 102 68.6
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.4e-31 137.9 102 68.6
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 4.4e-31 137.9 97 68.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 5.8e-31 137.5 101 68.3
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 7.5e-31 137.1 98 69.4
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.3e-30 136.3 97 67.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.3e-30 136.3 102 64.7
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.7e-30 136.0 102 66.7
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.7e-30 136.0 102 68.6
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 2.2e-30 135.6 103 66.0
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 2.2e-30 135.6 102 66.7
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 3.7e-30 134.8 96 67.7
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 3.7e-30 134.8 102 64.7
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.7e-30 134.8 100 66.0
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 4.9e-30 134.4 97 66.0
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 6.4e-30 134.0 90 74.4
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 6.4e-30 134.0 102 65.7
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 8.3e-30 133.7 90 72.2
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.1e-29 133.3 98 68.4
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.2e-29 131.7 91 69.2
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 7.1e-29 130.6 102 61.8
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 9.2e-29 130.2 101 62.4
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 4.6e-28 127.9 102 61.8
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.0e-27 126.7 101 69.3
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.3e-27 126.3 91 69.2
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 6.6e-27 124.0 94 64.9
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 6.6e-27 124.0 97 62.9
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.6e-23 112.1 66 81.8
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 6.4e-22 107.5 101 53.5
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.4e-21 106.3 150 42.0
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.9e-21 105.9 76 68.4
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 7.3e-18 94.0 99 49.5
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-17 92.4 65 69.2
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 6.2e-17 90.9 67 71.6
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.1e-16 90.1 93 48.4
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.5e-15 86.3 92 47.8
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.6e-12 76.3 48 70.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.5e-12 75.1 95 37.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 8.7e-11 70.5 83 39.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.9e-10 69.3 90 38.9
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 2.5e-10 68.9 45 77.8
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.9e-08 60.8 38 73.7


User provided reference genes

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