Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 3.8e-86 321.6 181 100.0
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 9.8e-50 200.7 182 75.3
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 6.4e-33 144.8 192 52.6
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 7.8e-31 137.9 181 52.5
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 3.7e-17 92.4 113 54.0
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 2.4e-16 89.7 88 61.4
Medtr7g060440 Medicago truncatula HOM05D005967 ORTHO05D005174 3.5e-15 85.9 196 40.3
Psat3g141040 Pisum sativum HOM05D005967 ORTHO05D005174 4.7e-12 75.5 79 59.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.8e-11 73.6 167 41.9
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.0e-10 70.1 98 48.0
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 7.6e-10 68.2 90 44.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.3e-09 67.4 83 50.6
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.3e-09 67.4 168 35.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.7e-09 67.0 71 54.9
Gohir.A09G156500 Gossypium hirsutum HOM05D036294 ORTHO05D036268 2.2e-09 66.6 86 51.2
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-09 66.6 113 43.4
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.9e-09 66.2 185 32.4
Medtr4g021870 Medicago truncatula HOM05D005967 ORTHO05D005174 3.8e-09 65.9 79 50.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 4.9e-09 65.5 98 46.9
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 6.4e-09 65.1 164 34.1
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 8.4e-09 64.7 90 50.0
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 8.4e-09 64.7 56 66.1
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-08 64.3 112 40.2
Gorai.006G173200 Gossypium raimondii HOM05D036294 ORTHO05D036268 1.4e-08 63.9 87 47.1
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.9e-08 63.5 87 50.6
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.2e-08 62.4 67 52.2
Gohir.D09G151850 Gossypium hirsutum HOM05D036294 ORTHO05D036268 4.2e-08 62.4 87 46.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 4.2e-08 62.4 92 50.0
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 7.1e-08 61.6 106 42.5
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 7.1e-08 61.6 111 42.3
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 9.3e-08 61.2 102 42.2
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 9.3e-08 61.2 102 42.2
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 9.3e-08 61.2 102 42.2
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 9.3e-08 61.2 89 47.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.2e-07 60.8 95 45.3
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.6e-07 60.5 77 50.6
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.6e-07 60.5 175 32.6
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 2.1e-07 60.1 95 47.4
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.7e-07 59.7 98 42.9
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.7e-07 59.7 180 35.0
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-07 59.7 84 51.2
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-07 59.7 142 35.2
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 4.6e-07 58.9 34 79.4
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.0e-07 58.5 92 47.8
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 6.0e-07 58.5 114 38.6
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.0e-07 58.5 80 52.5
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 7.8e-07 58.2 94 47.9
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.0e-06 57.8 68 58.8
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.0e-06 57.8 75 50.7
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.0e-06 57.8 173 34.1
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.3e-06 57.4 166 36.1
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.3e-06 57.4 91 47.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.7e-06 57.0 95 42.1
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-06 57.0 67 53.7
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.7e-06 57.0 79 48.1
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.7e-06 57.0 179 36.9
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.0e-06 56.2 85 44.7
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.0e-06 56.2 174 33.3
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.0e-06 56.2 174 33.3
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 8.7e-06 54.7 92 44.6
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 8.7e-06 54.7 42 64.3


User provided reference genes

Program Settings