Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.6e-166 589.3 288 100.0
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.1e-140 503.4 289 86.9
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 7.5e-129 464.2 272 87.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 8.4e-120 434.1 327 70.3
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.5e-116 423.3 299 73.2
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 2.6e-113 412.5 315 72.1
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 6.9e-106 387.9 310 66.5
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.5e-105 386.7 310 66.5
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.3e-104 383.6 299 69.9
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.4e-98 362.8 294 66.3
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 4.9e-96 355.1 310 63.9
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.1e-94 349.7 303 61.4
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 3.5e-94 349.0 295 63.7
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.0e-93 345.9 307 63.5
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 5.1e-93 345.1 303 61.4
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 7.4e-92 341.3 307 60.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.3e-91 340.5 301 62.5
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 4.0e-90 335.5 303 59.1
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 3.4e-89 332.4 308 62.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.7e-88 330.1 309 59.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 2.9e-88 329.3 286 63.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.4e-87 327.0 304 60.2
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.5e-87 326.2 286 62.9
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.2e-87 325.9 304 60.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.1e-87 324.7 286 62.6
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.6e-86 323.6 301 60.8
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 2.1e-86 323.2 301 60.5
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 4.6e-86 322.0 302 60.9
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.6e-86 322.0 304 60.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 6.0e-86 321.6 294 60.5
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 6.0e-86 321.6 290 61.4
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 6.0e-86 321.6 308 58.1
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 7.9e-86 321.2 312 59.9
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 3.0e-85 319.3 294 60.5
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.1e-84 317.4 288 60.1
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 2.5e-84 316.2 310 59.4
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-84 315.5 287 61.7
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-84 315.5 287 61.7
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 6.3e-83 311.6 298 60.4
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 3.1e-82 309.3 340 54.4
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.0e-81 306.6 294 58.8
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.0e-81 306.6 294 59.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 7.6e-81 304.7 299 57.9
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.7e-80 303.5 287 59.6
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.2e-80 303.1 335 54.3
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 3.8e-80 302.4 308 55.2
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 3.2e-79 299.3 308 54.5
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 7.2e-79 298.1 271 62.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.6e-78 297.0 300 55.7
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.7e-78 296.2 307 54.4
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.3e-77 293.9 303 53.5
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.3e-77 293.9 291 56.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 2.3e-77 293.1 306 54.2
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.3e-77 293.1 287 55.4
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 6.7e-77 291.6 295 57.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 5.7e-76 288.5 318 52.5
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 7.4e-76 288.1 291 55.3
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.2e-75 286.6 301 54.2
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.4e-74 283.1 288 53.1
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.2e-72 276.6 294 53.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.0e-72 275.4 294 53.4
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 1.1e-71 274.2 287 52.6
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 4.2e-71 272.3 282 53.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 5.5e-71 271.9 305 52.8
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.6e-70 270.4 294 51.0
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.6e-70 270.4 293 52.9
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.1e-70 270.0 310 51.0
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.7e-70 269.6 294 52.0
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.6e-70 269.2 282 53.5
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 6.1e-70 268.5 278 56.8
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.0e-69 267.7 301 51.2
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.8e-69 266.9 285 54.7
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.9e-69 265.8 288 53.8
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 5.1e-69 265.4 278 54.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 8.8e-69 264.6 293 52.2
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 8.8e-69 264.6 241 58.5
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.4e-68 262.3 349 46.1
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.8e-67 259.6 365 44.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.8e-67 258.8 312 51.3
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 8.2e-67 258.1 296 51.4
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 8.2e-67 258.1 301 50.5
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 2.4e-66 256.5 352 45.2
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 5.9e-65 251.9 285 51.9
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.8e-61 240.4 394 40.4
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.3e-59 234.2 318 48.1
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.3e-59 234.2 249 57.0
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.8e-59 233.0 294 49.7
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 6.3e-59 231.9 288 46.9
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 5.9e-57 225.3 128 84.4
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 7.2e-55 218.4 269 48.3
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.4e-53 214.2 280 46.1
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.2e-52 211.1 208 58.2
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.8e-51 206.5 109 83.5
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.1e-47 194.5 109 79.8
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 5.5e-47 192.2 109 78.9
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.0e-45 186.4 137 65.0
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 5.7e-44 182.2 98 82.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 6.3e-43 178.7 142 59.2
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.3e-40 171.0 98 79.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.8e-40 169.5 98 78.6
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 6.5e-40 168.7 162 53.1
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.5e-39 167.5 88 85.2
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 7.2e-39 165.2 208 51.0
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 5.4e-34 149.1 98 69.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 9.2e-34 148.3 127 63.8
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.7e-33 146.7 196 52.0
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 5.9e-33 145.6 98 70.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 3.3e-31 139.8 217 43.8
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.8e-21 105.5 206 37.9
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 1.7e-16 90.9 114 50.0
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-16 90.9 194 41.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 1.9e-15 87.4 114 50.9
VMungo1309G0027 Vigna mungo HOM05D006626 ORTHO05D007352 2.1e-14 84.0 81 61.7
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.4e-13 81.3 105 42.9
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.4e-13 81.3 105 42.9
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 2.3e-13 80.5 105 42.9
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 3.1e-13 80.1 105 41.9
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.4e-12 76.6 42 78.6
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 4.4e-12 76.3 41 82.9
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.3e-11 74.7 196 34.2
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.3e-11 74.7 185 37.3
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.2e-10 70.1 105 41.0
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.6e-09 67.8 44 65.9
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.8e-09 65.5 187 34.8
SMO230G0120 Selaginella moellendorffii HOM05D040121 ORTHO05D007352 5.6e-07 59.3 192 28.6


User provided reference genes

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