Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 4.5e-115 417.9 208 100.0
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 3.5e-83 312.0 212 76.4
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 8.5e-82 307.4 209 75.1
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 4.7e-80 301.6 212 74.1
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 6.7e-79 297.7 211 74.9
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 4.4e-78 295.0 216 72.7
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 8.0e-72 274.2 193 72.5
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 3.0e-71 272.3 210 64.8
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 3.8e-66 255.4 189 69.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 8.6e-66 254.2 192 66.7
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 3.3e-65 252.3 199 69.3
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 5.5e-65 251.5 186 67.7
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 5.5e-65 251.5 189 66.7
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 5.5e-65 251.5 189 66.7
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 5.5e-65 251.5 204 65.7
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 9.5e-65 250.8 186 68.3
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 1.2e-64 250.4 194 67.0
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 1.6e-64 250.0 205 63.4
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 1.6e-64 250.0 200 64.5
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 4.7e-64 248.4 201 64.2
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 8.0e-64 247.7 194 67.0
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 8.0e-64 247.7 202 63.9
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 8.0e-64 247.7 186 67.2
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 1.0e-63 247.3 186 66.7
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 1.0e-63 247.3 191 65.4
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 2.3e-63 246.1 187 67.9
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 2.3e-63 246.1 191 67.5
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 3.0e-63 245.7 200 63.0
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 4.0e-63 245.4 204 63.2
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 4.0e-63 245.4 219 59.8
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 6.8e-63 244.6 195 66.2
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 2.0e-62 243.0 200 66.0
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 3.4e-62 242.3 205 62.4
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 3.4e-62 242.3 202 62.4
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 4.4e-62 241.9 205 62.0
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 5.7e-62 241.5 211 61.6
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 7.5e-62 241.1 186 66.7
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 7.5e-62 241.1 202 64.4
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 9.8e-62 240.7 199 62.8
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 1.3e-61 240.4 200 65.0
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 1.7e-61 240.0 203 62.6
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 1.7e-61 240.0 201 62.7
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 2.2e-61 239.6 198 66.2
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 2.2e-61 239.6 204 64.7
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 2.8e-61 239.2 199 62.3
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 4.9e-61 238.4 218 59.2
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 6.3e-61 238.0 185 66.5
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 6.3e-61 238.0 184 67.4
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 6.3e-61 238.0 205 64.4
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 1.1e-60 237.3 190 65.3
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 1.8e-60 236.5 213 62.9
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 3.1e-60 235.7 204 63.2
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 4.1e-60 235.3 197 64.0
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.6e-59 233.4 189 65.1
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 3.5e-59 232.3 183 66.7
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 8.6e-58 227.6 218 54.6
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 1.1e-57 227.3 134 85.1
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 2.5e-57 226.1 218 56.0
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 3.3e-57 225.7 199 63.3
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 1.2e-56 223.8 198 59.6
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.6e-56 223.4 183 61.7
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 6.1e-56 221.5 200 59.5
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 1.0e-55 220.7 198 62.1
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 4.0e-55 218.8 198 58.1
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 4.0e-55 218.8 168 61.3
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 1.5e-54 216.9 184 63.0
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 2.6e-54 216.1 199 56.8
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 4.4e-54 215.3 199 57.3
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 8.3e-53 211.1 199 59.3
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 1.1e-52 210.7 211 52.6
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 3.2e-52 209.1 195 59.5
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 4.1e-52 208.8 240 50.8
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 4.1e-52 208.8 206 52.9
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 1.2e-51 207.2 143 71.3
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 1.6e-51 206.8 174 62.6
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 2.7e-51 206.1 146 71.9
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 2.7e-51 206.1 193 56.0
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 4.6e-51 205.3 194 54.6
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 1.3e-50 203.8 162 63.0
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 2.1e-48 196.4 143 72.7
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 2.8e-48 196.1 185 63.8
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 4.7e-48 195.3 228 52.2
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.4e-47 193.7 147 65.3
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 4.0e-47 192.2 227 51.5
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 4.0e-47 192.2 187 52.9
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 5.2e-47 191.8 195 56.4
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.5e-46 190.3 143 71.3
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 7.5e-46 188.0 206 50.0
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 7.8e-43 177.9 136 64.7
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 1.3e-42 177.2 118 66.1
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 3.9e-42 175.6 164 57.9
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 1.1e-41 174.1 279 40.1
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 6.2e-40 168.3 123 66.7
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 8.1e-40 167.9 133 61.7
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 8.9e-39 164.5 142 55.6
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 2.4e-36 156.4 140 55.0
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 4.1e-36 155.6 161 54.0
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 1.6e-35 153.7 137 56.9
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 3.3e-33 146.0 283 37.8
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 5.6e-33 145.2 115 65.2
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 9.9e-30 134.4 96 71.9
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 6.4e-29 131.7 104 62.5
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 1.6e-24 117.1 114 59.6
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.9e-17 93.6 216 35.6
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 9.6e-17 91.3 105 41.0
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 1.6e-16 90.5 76 64.5
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 6.2e-16 88.6 71 63.4
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 2.4e-15 86.7 88 46.6
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 5.3e-15 85.5 65 64.6
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 1.2e-11 74.3 113 41.6
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 1.0e-10 71.2 64 56.2
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 3.7e-08 62.8 123 30.9
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 6.2e-08 62.0 123 30.9
RcHm_v2.0_Chr3g0494981 Rosa chinensis HOM05D002397 ORTHO05D002667 2.6e-06 56.6 148 30.4
Hund18476 Selenicereus undatus HOM05D007131 ORTHO05D009026 2.6e-06 56.6 133 35.3
CBR_g50359 Chara braunii HOM05D002397 ORTHO05D002667 3.4e-06 56.2 105 28.6
Eucgr.K01707 Eucalyptus grandis HOM05D002397 ORTHO05D002667 3.4e-06 56.2 147 28.6
Gohir.D13G000600 Gossypium hirsutum HOM05D002397 ORTHO05D002667 3.4e-06 56.2 151 29.1
Gorai.013G000500 Gossypium raimondii HOM05D002397 ORTHO05D002667 3.4e-06 56.2 151 29.1
ATR0307G077 Amborella trichopoda HOM05D002397 ORTHO05D002667 4.5e-06 55.8 150 27.3
Oeu034906.1 Olea europaea HOM05D002397 ORTHO05D002667 4.5e-06 55.8 153 29.4
SEGI_32624 Sequoiadendron giganteum HOM05D002397 ORTHO05D002667 7.6e-06 55.1 136 29.4


User provided reference genes

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