Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G312900 Glycine max HOM05D004117 ORTHO05D004520 6.0e-35 150.2 72 100.0
Glyma.09G101300 Glycine max HOM05D004117 ORTHO05D004520 3.3e-33 144.4 70 97.1
Glyma.18G102500 Glycine max HOM05D004117 ORTHO05D004520 1.1e-31 139.4 70 91.4
Phvul.006G038200 Phaseolus vulgaris HOM05D004117 ORTHO05D004520 6.2e-24 113.6 71 78.9
Lj6g0002139 Lotus japonicus HOM05D004117 ORTHO05D004520 1.5e-22 109.0 68 73.5
arahy.Tifrunner.gnm1.ann1.X0GQC6 Arachis hypogaea HOM05D004117 ORTHO05D004520 1.4e-20 102.4 70 64.3
arahy.Tifrunner.gnm1.ann1.A5IPPM Arachis hypogaea HOM05D004117 ORTHO05D004520 7.1e-20 100.1 70 62.9
Lalb_Chr15g0080421 Lupinus albus HOM05D004117 ORTHO05D004520 1.3e-18 95.9 77 66.2
VMungo0540G1454 Vigna mungo HOM05D004117 ORTHO05D004520 1.3e-18 95.9 74 66.2
Lalb_Chr10g0106881 Lupinus albus HOM05D004117 ORTHO05D004520 1.5e-17 92.4 71 64.8
TPR.G22233 Trifolium pratense HOM05D004117 ORTHO05D004520 1.9e-17 92.0 81 59.3
Medtr8g016090 Medicago truncatula HOM05D004117 ORTHO05D004520 9.7e-17 89.7 78 61.5
arahy.Tifrunner.gnm1.ann1.N5266S Arachis hypogaea HOM05D004117 ORTHO05D004520 5.9e-14 80.5 64 54.7
Prupe.3G108900 Prunus persica HOM05D004117 ORTHO05D004520 2.2e-13 78.6 70 50.0
CiPaw.04G134900 Carya illinoinensis HOM05D004117 ORTHO05D004520 2.9e-13 78.2 66 53.0
QL08p042899 Quercus lobata HOM05D004117 ORTHO05D004520 3.8e-13 77.8 66 53.0
Dinv11422 Davidia involucrata HOM05D004117 ORTHO05D004520 1.4e-12 75.9 66 51.5
MD09G1233800 Malus domestica HOM05D004117 ORTHO05D004520 4.6e-11 70.9 66 48.5
Psat4g191560 Pisum sativum HOM05D004117 ORTHO05D004520 4.6e-11 70.9 83 50.6
TAR030G0002 Trochodendron aralioides HOM05D004117 ORTHO05D004520 4.6e-11 70.9 69 49.3
Dinv03089 Davidia involucrata HOM05D004117 ORTHO05D004520 1.0e-10 69.7 66 50.0
PSO675G6070 Papaver somniferum HOM05D004117 ORTHO05D004520 8.8e-10 66.6 67 52.2
Duzib147G1030 Durio zibethinus HOM05D004117 ORTHO05D004520 1.5e-09 65.9 66 50.0
Nn3g21103 Nelumbo nucifera HOM05D004117 ORTHO05D004520 1.5e-09 65.9 66 51.5
FvH4_6g27890 Fragaria vesca HOM05D004117 ORTHO05D004520 4.3e-09 64.3 70 44.3
FAN14G3113 Fragaria x ananassa HOM05D004117 ORTHO05D004520 4.3e-09 64.3 70 44.3
COL.COLO4_33652 Corchorus olitorius HOM05D004117 ORTHO05D004520 7.4e-09 63.5 71 46.5
MD17G1230200 Malus domestica HOM05D004117 ORTHO05D004520 7.4e-09 63.5 66 43.9
FAN05G5128 Fragaria x ananassa HOM05D004117 ORTHO05D004520 9.7e-09 63.2 70 42.9
FAN09G0194 Fragaria x ananassa HOM05D004117 ORTHO05D004520 9.7e-09 63.2 70 42.9
PSO541G2160 Papaver somniferum HOM05D004117 ORTHO05D004520 2.8e-08 61.6 67 49.3
CANSAT64G1854 Cannabis sativa HOM05D004117 ORTHO05D004520 4.8e-08 60.8 71 45.1
Manes.02G087500 Manihot esculenta HOM05D004117 ORTHO05D004520 4.8e-08 60.8 67 47.8
FAN02G0254 Fragaria x ananassa HOM05D004117 ORTHO05D004520 6.3e-08 60.5 70 41.4
Thecc.01G156100 Theobroma cacao HOM05D004117 ORTHO05D004520 1.1e-07 59.7 66 45.5
GSVIVG01020780001 Vitis vinifera HOM05D004117 ORTHO05D004520 1.1e-07 59.7 66 47.0
Duzib264G0691 Durio zibethinus HOM05D004117 ORTHO05D004520 1.4e-07 59.3 66 50.0
Gohir.D11G064000 Gossypium hirsutum HOM05D004117 ORTHO05D004520 4.1e-07 57.8 66 45.5
Gorai.007G069200 Gossypium raimondii HOM05D004117 ORTHO05D004520 4.1e-07 57.8 66 45.5
Hma1.2p1_0178F.1_g078380 Hydrangea macrophylla HOM05D004117 ORTHO05D004520 5.3e-07 57.4 74 41.9
RcHm_v2.0_Chr2g0131361 Rosa chinensis HOM05D004117 ORTHO05D004520 5.3e-07 57.4 70 41.4
arahy.Tifrunner.gnm1.ann1.0DU9MH Arachis hypogaea HOM05D007334 ORTHO05D004520 6.9e-07 57.0 71 42.3
arahy.Tifrunner.gnm1.ann1.EL27YX Arachis hypogaea HOM05D004117 ORTHO05D004520 1.5e-06 55.8 71 42.3
arahy.Tifrunner.gnm1.ann1.E1YPH0 Arachis hypogaea HOM05D004117 ORTHO05D004520 2.0e-06 55.5 71 42.3
Gohir.A11G059900 Gossypium hirsutum HOM05D004117 ORTHO05D004520 2.0e-06 55.5 66 45.5
Lj1C629G7 Lonicera japonica HOM05D004117 ORTHO05D004520 2.6e-06 55.1 70 41.4
arahy.Tifrunner.gnm1.ann1.S8R0TP Arachis hypogaea HOM05D004117 ORTHO05D004520 3.4e-06 54.7 71 42.3
Aqoxy1G01993 Aquilegia oxysepala HOM05D004117 ORTHO05D004520 7.7e-06 53.5 41 58.5


User provided reference genes

Program Settings