Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.5e-181 639.4 337 100.0
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.0e-169 600.1 337 94.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.2e-165 586.6 337 90.5
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 3.3e-160 568.5 321 92.5
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.0e-156 557.0 339 86.1
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.4e-155 553.1 337 85.8
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.1e-154 547.7 337 84.6
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.0e-153 547.0 337 84.3
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 4.3e-152 541.6 337 84.0
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.7e-151 538.5 337 83.4
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 5.0e-148 528.1 321 86.0
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 9.4e-147 523.9 327 84.1
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.4e-142 510.0 332 78.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.0e-140 503.8 337 77.7
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 2.2e-140 502.7 337 77.2
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 8.5e-140 500.7 337 76.9
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.5e-139 500.0 337 76.9
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.2e-138 496.9 337 76.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 2.1e-138 496.1 329 77.5
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 6.1e-138 494.6 329 74.5
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 8.0e-138 494.2 336 75.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 1.4e-137 493.4 337 74.5
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.1e-136 490.3 337 75.4
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.5e-136 490.0 338 75.7
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 2.0e-136 489.6 336 75.0
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 3.3e-136 488.8 337 76.3
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 4.4e-136 488.4 334 75.4
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 5.7e-136 488.0 338 75.1
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 4.8e-135 485.0 337 74.8
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 8.2e-135 484.2 316 78.8
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 8.2e-135 484.2 336 74.7
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.8e-134 483.0 336 73.8
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.1e-134 482.3 337 73.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 5.3e-134 481.5 328 75.3
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 7.0e-134 481.1 334 74.3
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 9.1e-134 480.7 338 74.3
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.0e-133 479.6 329 74.8
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.0e-133 479.6 330 72.7
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 2.0e-133 479.6 325 75.7
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 2.0e-133 479.6 337 73.0
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 2.6e-133 479.2 330 72.7
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 7.7e-133 477.6 335 74.0
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.7e-132 476.5 332 73.5
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 2.2e-132 476.1 336 73.8
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.9e-132 475.7 337 73.9
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 5.0e-132 474.9 337 71.8
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.1e-131 473.8 329 74.2
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 9.4e-131 470.7 336 72.3
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.6e-130 469.9 337 73.3
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.6e-130 469.9 337 72.7
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.1e-130 469.5 328 74.4
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 3.6e-130 468.8 329 72.6
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 8.0e-130 467.6 337 72.7
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.4e-129 466.8 337 72.4
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 5.2e-129 464.9 329 73.3
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 5.2e-129 464.9 374 67.9
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 8.8e-129 464.2 337 72.1
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 8.8e-129 464.2 329 72.0
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 5.7e-128 461.5 327 73.7
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 7.5e-128 461.1 326 73.0
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.3e-127 460.3 335 70.7
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.8e-126 456.4 337 72.1
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 4.1e-126 455.3 335 70.4
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.0e-125 453.0 398 64.1
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 5.9e-125 451.4 337 69.4
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 5.9e-125 451.4 332 69.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.3e-124 450.3 346 69.7
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 1.7e-124 449.9 329 69.3
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 1.1e-123 447.2 337 68.5
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 4.2e-123 445.3 337 68.5
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 5.5e-123 444.9 329 70.5
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 9.4e-123 444.1 330 69.4
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 4.7e-122 441.8 336 68.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 4.4e-120 435.3 331 68.3
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 4.4e-120 435.3 321 69.5
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.1e-118 430.6 331 67.4
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 2.8e-114 416.0 344 64.5
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 7.5e-112 407.9 337 65.3
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 9.8e-112 407.5 337 65.6
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 9.8e-112 407.5 265 77.0
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.2e-111 406.4 337 64.1
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.1e-110 404.1 282 75.2
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 5.9e-109 398.3 294 68.7
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.9e-107 393.3 332 64.5
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 3.3e-107 392.5 329 63.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 7.3e-107 391.3 329 63.8
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.2e-103 379.8 336 61.3
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 3.9e-100 369.0 254 72.4
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.9e-99 366.7 326 57.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 3.0e-92 342.8 329 52.6
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 3.6e-90 335.9 244 70.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 2.0e-88 330.1 321 54.5
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.9e-87 325.5 207 77.8
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 8.6e-84 314.7 325 52.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 4.7e-82 308.9 197 76.1
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.9e-79 298.9 325 49.5
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 2.5e-75 286.6 201 75.6
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 2.8e-74 283.1 177 78.0
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.1e-70 271.2 238 63.4
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.3e-67 259.6 325 45.2
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 2.4e-65 253.4 310 47.1
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.9e-64 248.1 374 44.7
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.9e-62 243.8 348 41.1
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 8.7e-60 235.0 175 66.9
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.1e-49 201.4 175 53.7
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.1e-43 181.4 153 66.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.2e-42 177.2 278 43.5
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.2e-42 177.2 278 43.5
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.9e-38 164.1 334 31.7
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.6e-32 143.7 86 77.9
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.4e-30 137.9 125 64.0
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 9.7e-27 125.2 124 56.5
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.0e-23 115.2 338 30.2
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 5.0e-23 112.8 74 70.3
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-16 90.5 72 68.1
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-16 90.5 72 68.1
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 3.4e-11 73.6 55 72.7
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 4.2e-06 56.6 35 77.1


User provided reference genes

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