Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G289300 Glycine max HOM05D008443 ORTHO05D010587 2.3e-29 131.7 74 100.0
Phvul.003G053700 Phaseolus vulgaris HOM05D008443 ORTHO05D010587 6.2e-27 123.6 74 85.1
Glyma.18G135000 Glycine max HOM05D008443 ORTHO05D010587 6.9e-26 120.2 73 86.3
VMungo0251G0489 Vigna mungo HOM05D008443 ORTHO05D010587 1.1e-23 112.8 73 80.8
TPR.G35976 Trifolium pratense HOM05D008443 ORTHO05D010587 5.3e-18 94.0 74 66.2
Lalb_Chr16g0382381 Lupinus albus HOM05D008443 ORTHO05D010587 1.2e-17 92.8 71 60.6
Manes.05G088700 Manihot esculenta HOM05D008443 ORTHO05D010587 5.8e-17 90.5 70 62.9
Medtr8g063410 Medicago truncatula HOM05D008443 ORTHO05D010587 2.4e-15 85.1 74 66.2
Manes.01G198240 Manihot esculenta HOM05D008443 ORTHO05D010587 4.2e-15 84.3 70 60.0
QL03p061920 Quercus lobata HOM05D008443 ORTHO05D010587 3.5e-14 81.3 69 62.3
Gohir.A05G318400 Gossypium hirsutum HOM05D008443 ORTHO05D010587 4.6e-14 80.9 76 51.3
Duzib268G1406 Durio zibethinus HOM05D008443 ORTHO05D010587 1.3e-13 79.3 77 51.9
ClCG05G025160 Citrullus lanatus HOM05D008443 ORTHO05D010587 3.0e-13 78.2 72 55.6
CSS0001689 Camellia sinensis var. sinensis HOM05D008443 ORTHO05D010587 6.7e-13 77.0 76 53.9
Gorai.009G343700 Gossypium raimondii HOM05D008443 ORTHO05D010587 1.5e-12 75.9 76 59.2
Lj2g0011197 Lotus japonicus HOM05D008443 ORTHO05D010587 1.9e-12 75.5 76 60.5
Gohir.A03G141200 Gossypium hirsutum HOM05D008443 ORTHO05D010587 4.3e-12 74.3 76 51.3
Gorai.005G184100 Gossypium raimondii HOM05D008443 ORTHO05D010587 4.3e-12 74.3 76 51.3
Gohir.D05G320600 Gossypium hirsutum HOM05D008443 ORTHO05D010587 7.4e-12 73.6 75 49.3
CsaV3_5G031740 Cucumis sativus L. HOM05D008443 ORTHO05D010587 1.3e-11 72.8 74 60.8
Gohir.D02G164100 Gossypium hirsutum HOM05D008443 ORTHO05D010587 1.3e-11 72.8 75 52.0
CiPaw.05G147800 Carya illinoinensis HOM05D008443 ORTHO05D010587 3.7e-11 71.2 48 68.8
MELO3C012013.2 Cucumis melo HOM05D008443 ORTHO05D010587 6.2e-11 70.5 74 59.5
Nn3g16936 Nelumbo nucifera HOM05D008443 ORTHO05D010587 6.2e-11 70.5 59 59.3
TAR629G3213 Trochodendron aralioides HOM05D008443 ORTHO05D010587 1.1e-10 69.7 69 49.3
MD16G1089300 Malus domestica HOM05D008443 ORTHO05D010587 1.4e-10 69.3 48 68.8
Prupe.1G256700 Prunus persica HOM05D008443 ORTHO05D010587 1.4e-10 69.3 48 68.8
Rhsim12G0048000 Rhododendron simsii HOM05D008443 ORTHO05D010587 1.8e-10 68.9 70 51.4
MD13G1089100 Malus domestica HOM05D008443 ORTHO05D010587 5.3e-10 67.4 48 68.8
Aqoxy3G03049 Aquilegia oxysepala HOM05D008443 ORTHO05D010587 6.9e-10 67.0 48 62.5
CANSAT01G1518 Cannabis sativa HOM05D008443 ORTHO05D010587 6.9e-10 67.0 68 51.5
MBI15_g19742_MAGBIO Magnolia biondii HOM05D008443 ORTHO05D010587 6.9e-10 67.0 48 60.4
Eucgr.B03356 Eucalyptus grandis HOM05D008443 ORTHO05D010587 9.0e-10 66.6 49 63.3
PGR102G0936 Punica granatum HOM05D008443 ORTHO05D010587 3.4e-09 64.7 48 60.4
TWI36G1347 Tripterygium wilfordii HOM05D008443 ORTHO05D010587 5.8e-09 63.9 67 52.2
Sc11g0001310 Simmondsia chinensis HOM05D008443 ORTHO05D010587 7.6e-09 63.5 48 64.6
MSTRG.2385 Avicennia marina HOM05D008443 ORTHO05D010587 2.2e-08 62.0 58 51.7
Lsat_1_v5_gn_3_47940 Lactuca sativa HOM05D008443 ORTHO05D010587 2.2e-08 62.0 51 56.9
CDE07G0196 Ceratophyllum demersum HOM05D008443 ORTHO05D010587 2.5e-07 58.5 63 50.8
ATR1149G093 Amborella trichopoda HOM05D008443 ORTHO05D010587 7.1e-07 57.0 52 55.8
RcHm_v2.0_Chr4g0444191 Rosa chinensis HOM05D008443 ORTHO05D010587 7.1e-07 57.0 48 58.3
Cfa019086 Carpinus fangiana HOM05D008443 ORTHO05D010587 9.3e-07 56.6 67 43.3
AUR62013990 Chenopodium quinoa HOM05D008443 ORTHO05D010587 9.3e-07 56.6 53 50.9
Dinv31086 Davidia involucrata HOM05D000086 ORTHO05D000983 9.3e-07 56.6 58 50.0
SEGI_04815 Sequoiadendron giganteum HOM05D008443 ORTHO05D010587 1.2e-06 56.2 47 57.4
FAN17G0561 Fragaria x ananassa HOM05D008443 ORTHO05D010587 1.6e-06 55.8 48 52.1
FAN22G1825 Fragaria x ananassa HOM05D008443 ORTHO05D010587 1.6e-06 55.8 48 52.1
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 2.1e-06 55.5 49 51.0
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 2.1e-06 55.5 49 51.0
HPP92_010558 Vanilla planifolia HOM05D008443 ORTHO05D010587 6.0e-06 53.9 48 52.1
Haze_07480 Corylus avellana HOM05D008443 ORTHO05D010587 7.9e-06 53.5 58 41.4


User provided reference genes

Program Settings