Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G287866 Glycine max HOM05D000041 ORTHO05D008213 2.8e-91 338.6 166 100.0
Glyma.18G137600 Glycine max HOM05D000041 ORTHO05D008213 1.9e-60 236.1 239 55.2
VMungo0251G3655 Vigna mungo HOM05D000041 ORTHO05D008213 1.6e-54 216.5 241 50.6
Phvul.003G052300 Phaseolus vulgaris HOM05D000041 ORTHO05D008213 9.6e-52 207.2 242 49.6
arahy.Tifrunner.gnm1.ann1.HSMU8H Arachis hypogaea HOM05D000041 ORTHO05D008213 3.9e-37 158.7 231 39.4
arahy.Tifrunner.gnm1.ann1.I2ULHV Arachis hypogaea HOM05D000041 ORTHO05D008213 3.9e-37 158.7 231 39.4
MD09G1035700 Malus domestica HOM05D000041 ORTHO05D008213 2.9e-32 142.5 147 47.6
Duzib251G0332 Durio zibethinus HOM05D000041 ORTHO05D008213 1.8e-29 133.3 245 34.7
RcHm_v2.0_Chr2g0170941 Rosa chinensis HOM05D000041 ORTHO05D008213 5.1e-29 131.7 153 43.1
Gorai.005G183100 Gossypium raimondii HOM05D000041 ORTHO05D008213 1.9e-28 129.8 217 35.9
Prupe.1G254900 Prunus persica HOM05D000041 ORTHO05D008213 1.9e-28 129.8 192 38.5
Cpa.g.sc140.42 Carica papaya HOM05D000041 ORTHO05D008213 5.7e-28 128.3 226 34.5
Gohir.D02G163100 Gossypium hirsutum HOM05D000041 ORTHO05D008213 1.3e-27 127.1 217 35.5
Dinv35049 Davidia involucrata HOM05D000041 ORTHO05D008213 2.1e-27 126.3 211 35.1
Manes.17G122900 Manihot esculenta HOM05D000041 ORTHO05D008213 8.2e-27 124.4 167 40.1
Prupe.3G282300 Prunus persica HOM05D000041 ORTHO05D008213 1.1e-26 124.0 194 36.6
Dinv15310 Davidia involucrata HOM05D000041 ORTHO05D008213 9.0e-26 120.9 235 32.8
Gohir.A03G140400 Gossypium hirsutum HOM05D000041 ORTHO05D008213 9.0e-26 120.9 231 32.0
Lj3C1051T12 Lonicera japonica HOM05D000041 ORTHO05D008213 1.2e-25 120.6 245 32.2
FAN07G0244 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.0e-24 117.5 173 41.6
Hma1.2p1_0802F.1_g220530 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 1.7e-24 116.7 247 32.4
Hma1.2p1_0967F.1_g242270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 1.7e-24 116.7 247 32.4
FAN25G2233 Fragaria x ananassa HOM05D000041 ORTHO05D008213 2.2e-24 116.3 202 34.2
TWI75G0105 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 5.0e-24 115.2 255 32.2
PGSC0003DMG400004108 Solanum tuberosum HOM05D000041 ORTHO05D008213 6.5e-24 114.8 202 34.2
PGSC0003DMG400030988 Solanum tuberosum HOM05D000041 ORTHO05D008213 6.5e-24 114.8 202 34.2
FAN12G3476 Fragaria x ananassa HOM05D000041 ORTHO05D008213 8.4e-24 114.4 229 34.5
Eucgr.H02614 Eucalyptus grandis HOM05D000041 ORTHO05D008213 1.9e-23 113.2 215 32.1
QL03p061546 Quercus lobata HOM05D000041 ORTHO05D008213 1.9e-23 113.2 236 31.4
Ciclev10018188m.g Citrus clementina HOM05D000427 ORTHO05D008213 2.5e-23 112.8 224 32.1
MD13G1091000 Malus domestica HOM05D000041 ORTHO05D008213 2.5e-23 112.8 210 33.8
CSS0022464 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.2e-23 112.5 134 43.3
Cpa.g.sc69.17 Carica papaya HOM05D000041 ORTHO05D008213 3.2e-23 112.5 204 35.8
FvH4_4g34600 Fragaria vesca HOM05D000041 ORTHO05D008213 3.2e-23 112.5 235 33.6
CAN.G680.25 Capsicum annuum HOM05D000041 ORTHO05D008213 4.2e-23 112.1 186 37.1
Actinidia13516 Actinidia chinensis HOM05D000041 ORTHO05D008213 5.5e-23 111.7 234 31.2
Hma1.2p1_0867F.1_g230270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 7.1e-23 111.3 243 28.4
QL02p076968 Quercus lobata HOM05D000427 ORTHO05D008213 7.1e-23 111.3 238 30.3
MBI15_g31114_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D008213 9.3e-23 110.9 193 35.2
CSS0030396 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 1.2e-22 110.5 134 42.5
CiPaw.05G150100 Carya illinoinensis HOM05D000041 ORTHO05D008213 1.6e-22 110.2 243 30.5
DCAR_011214 Daucus carota HOM05D000041 ORTHO05D008213 2.1e-22 109.8 206 34.0
RcHm_v2.0_Chr4g0443971 Rosa chinensis HOM05D000041 ORTHO05D008213 2.1e-22 109.8 108 52.8
Thecc.02G244000 Theobroma cacao HOM05D000041 ORTHO05D008213 2.1e-22 109.8 121 46.3
FAN17G1009 Fragaria x ananassa HOM05D000041 ORTHO05D008213 3.5e-22 109.0 245 32.2
Actinidia16928 Actinidia chinensis HOM05D000427 ORTHO05D008213 6.1e-22 108.2 234 31.6
Lsat_1_v5_gn_0_26320 Lactuca sativa HOM05D000041 ORTHO05D008213 6.1e-22 108.2 187 35.3
Thecc.04G007600 Theobroma cacao HOM05D000041 ORTHO05D008213 7.9e-22 107.8 248 31.0
FAN22G0375 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.8e-21 106.7 108 50.9
Nitab4.5_0000113g0200 Nicotiana tabacum HOM05D000041 ORTHO05D008213 1.8e-21 106.7 204 32.4
Manes.12G029800 Manihot esculenta HOM05D000041 ORTHO05D008213 3.0e-21 105.9 246 29.3
Rhsim12G0121300 Rhododendron simsii HOM05D000041 ORTHO05D008213 3.0e-21 105.9 246 30.1
GSVIVG01032499001 Vitis vinifera HOM05D000041 ORTHO05D008213 3.9e-21 105.5 257 28.4
COL.COLO4_04780 Corchorus olitorius HOM05D000041 ORTHO05D008213 8.7e-21 104.4 243 29.6
Migut.L01405 Erythranthe guttata HOM05D000041 ORTHO05D008213 1.5e-20 103.6 168 39.3
PGSC0003DMG400000500 Solanum tuberosum HOM05D000041 ORTHO05D008213 1.5e-20 103.6 209 31.6
Oeu001741.1 Olea europaea HOM05D000041 ORTHO05D008213 1.9e-20 103.2 237 29.5
Aqoxy3G00996 Aquilegia oxysepala HOM05D000041 ORTHO05D008213 4.3e-20 102.1 243 29.6
FAN11G1506 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.6e-19 100.1 126 42.9
FvH4_3g27000 Fragaria vesca HOM05D000041 ORTHO05D008213 2.2e-19 99.8 126 42.9
CANSAT01G1335 Cannabis sativa HOM05D000427 ORTHO05D008213 3.7e-19 99.0 245 28.2
FAN21G3251 Fragaria x ananassa HOM05D000041 ORTHO05D008213 3.7e-19 99.0 126 42.1
TWI36G0142 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 3.7e-19 99.0 243 28.4
SalBow2G0112 Salvia bowleyana HOM05D000427 ORTHO05D008213 4.8e-19 98.6 238 30.3
FAN16G3398 Fragaria x ananassa HOM05D000106 ORTHO05D008213 8.2e-19 97.8 126 41.3
Solyc05g005660.1 Solanum lycopersicum HOM05D000041 ORTHO05D008213 8.2e-19 97.8 239 28.5
Sopen05g001660 Solanum pennellii HOM05D000041 ORTHO05D008213 1.1e-18 97.4 239 28.5
Solyc02g086960.2 Solanum lycopersicum HOM05D000517 ORTHO05D008213 1.8e-18 96.7 207 32.4
Gohir.A09G025800 Gossypium hirsutum HOM05D000427 ORTHO05D008213 2.4e-18 96.3 237 30.0
PGR119G0660 Punica granatum HOM05D000041 ORTHO05D008213 2.4e-18 96.3 253 28.5
TAR629G3487 Trochodendron aralioides HOM05D000041 ORTHO05D008213 2.4e-18 96.3 108 45.4
vmacro16260 Vaccinium macrocarpon HOM05D000427 ORTHO05D008213 2.4e-18 96.3 240 29.6
Cc11_g14580 Coffea canephora HOM05D000041 ORTHO05D008213 3.1e-18 95.9 250 26.0
Haze_12168 Corylus avellana HOM05D000041 ORTHO05D008213 4.1e-18 95.5 115 42.6
Gorai.006G029200 Gossypium raimondii HOM05D000427 ORTHO05D008213 4.1e-18 95.5 237 29.5
Gohir.D09G025100 Gossypium hirsutum HOM05D000427 ORTHO05D008213 9.0e-18 94.4 247 28.3
PSO017G2181 Papaver somniferum HOM05D000041 ORTHO05D008213 1.5e-17 93.6 243 28.4
DCAR_015038 Daucus carota HOM05D000041 ORTHO05D008213 3.4e-17 92.4 240 27.5
Nitab4.5_0002579g0050 Nicotiana tabacum HOM05D000041 ORTHO05D008213 3.4e-17 92.4 241 27.0
Lsat_1_v5_gn_8_159800 Lactuca sativa HOM05D000041 ORTHO05D008213 1.3e-16 90.5 243 28.4
MD13G1090700 Malus domestica HOM05D000041 ORTHO05D008213 1.7e-16 90.1 114 40.4
CAN.G206.38 Capsicum annuum HOM05D000427 ORTHO05D008213 2.9e-16 89.4 214 31.3
ECA233G2133 Erigeron canadensis HOM05D000041 ORTHO05D008213 2.9e-16 89.4 237 27.8
DCAR_024142 Daucus carota HOM05D000054 ORTHO05D008213 3.8e-16 89.0 245 27.8
Peaxi162Scf00129g01041 Petunia axillaris HOM05D000427 ORTHO05D008213 3.2e-15 85.9 250 26.4
Peaxi162Scf00338g00013 Petunia axillaris HOM05D000041 ORTHO05D008213 3.2e-15 85.9 112 37.5
HanXRQChr08g0208831 Helianthus annuus HOM05D000041 ORTHO05D008213 2.1e-14 83.2 240 25.4
Nitab4.5_0003454g0020 Nicotiana tabacum HOM05D000041 ORTHO05D008213 6.1e-14 81.6 112 36.6
Glyma.19G010700 Glycine max HOM05D000041 ORTHO05D008213 1.0e-13 80.9 137 33.6
Duzib268G1618 Durio zibethinus HOM05D000041 ORTHO05D008213 1.4e-13 80.5 190 30.0
ECA246G3360 Erigeron canadensis HOM05D000041 ORTHO05D008213 2.0e-12 76.6 109 38.5
ATR0691G246 Amborella trichopoda HOM05D000041 ORTHO05D008213 9.7e-12 74.3 233 26.6
Migut.H00136 Erythranthe guttata HOM05D000041 ORTHO05D008213 1.4e-10 70.5 197 27.9
Actinidia15039 Actinidia chinensis HOM05D000041 ORTHO05D008213 2.9e-08 62.8 108 36.1
Lj4g0003256 Lotus japonicus HOM05D000041 ORTHO05D008213 4.2e-07 58.9 34 82.4
Sopen02g031730 Solanum pennellii HOM05D000427 ORTHO05D008213 9.4e-07 57.8 187 28.9
Lju41A34T47 Lonicera japonica HOM05D000041 ORTHO05D008213 1.2e-06 57.4 56 55.4
Nitab4.5_0001952g0020 Nicotiana tabacum HOM05D000106 ORTHO05D001065 2.1e-06 56.6 87 34.5
CSS0027827 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.6e-06 55.8 36 69.4
Cfa009135 Carpinus fangiana HOM05D000041 ORTHO05D008213 3.6e-06 55.8 115 30.4


User provided reference genes

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