Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 100.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 3.7e-22 107.5 60 85.0
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 2.4e-21 104.8 60 83.3
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 80.0
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 80.0
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 81.7
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 2.0e-20 101.7 59 81.4
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 2.7e-20 101.3 60 81.7
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.6e-20 100.5 60 80.0
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.6e-20 100.5 60 80.0
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 4.6e-20 100.5 60 80.0
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 6.0e-20 100.1 59 79.7
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 7.8e-20 99.8 60 80.0
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.0e-19 99.4 60 80.0
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.0e-19 99.4 60 80.0
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.0e-19 99.4 60 80.0
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.0e-19 99.4 60 80.0
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-19 99.0 60 78.3
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.7e-19 98.6 58 79.3
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 2.3e-19 98.2 60 78.3
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.3e-19 98.2 58 79.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.9e-19 97.4 56 82.1
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 6.6e-19 96.7 60 78.3
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 8.6e-19 96.3 60 78.3
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 2.5e-18 94.7 59 76.3
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 4.3e-18 94.0 60 76.7
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.3e-18 94.0 60 71.7
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-17 91.7 59 74.6
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 3.6e-17 90.9 50 80.0
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 5.8e-15 83.6 54 72.2
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 9.8e-15 82.8 51 78.4
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 3.5e-12 74.3 43 79.1
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.7e-11 72.0 41 78.0
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 9.5e-10 66.2 41 70.7
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 3.6e-09 64.3 38 73.7
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 3.6e-09 64.3 38 73.7
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.1e-08 62.8 44 70.5
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.4e-08 62.4 58 53.4
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 5.2e-08 60.5 38 78.9
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 6.8e-08 60.1 39 71.8
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.0e-07 58.5 38 76.3
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.4e-07 57.4 37 75.7
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 2.2e-06 55.1 41 56.1
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 2.2e-06 55.1 41 56.1
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 4.9e-06 53.9 30 80.0
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 8.4e-06 53.1 30 76.7


User provided reference genes

Program Settings