Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G224900 Glycine max HOM05D005569 ORTHO05D007052 3.0e-37 157.9 75 100.0
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.5e-07 59.3 29 89.7
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 3.2e-07 58.2 31 80.6
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 5.5e-07 57.4 30 80.0
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 5.5e-07 57.4 30 80.0
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 7.2e-07 57.0 29 82.8
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 7.2e-07 57.0 30 76.7
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 9.4e-07 56.6 30 80.0
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 9.4e-07 56.6 30 80.0
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 1.2e-06 56.2 30 76.7
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 1.2e-06 56.2 30 76.7
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.6e-06 55.8 28 82.1
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 1.6e-06 55.8 28 82.1
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.1e-06 55.5 30 73.3
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 2.1e-06 55.5 29 79.3
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 2.7e-06 55.1 30 70.0
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 2.7e-06 55.1 29 79.3
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 2.7e-06 55.1 30 76.7
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 2.7e-06 55.1 30 76.7
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 3.6e-06 54.7 28 78.6
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 3.6e-06 54.7 28 78.6
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 3.6e-06 54.7 28 78.6
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 4.7e-06 54.3 28 75.0
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 4.7e-06 54.3 30 73.3
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 4.7e-06 54.3 30 73.3
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 4.7e-06 54.3 30 73.3
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 8.0e-06 53.5 30 76.7


User provided reference genes

Program Settings