Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 2.1e-99 365.5 168 100.0
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 7.3e-84 313.9 166 88.0
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 5.3e-82 307.8 168 84.5
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 9.0e-82 307.0 168 83.3
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 2.9e-80 302.0 166 83.7
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 9.3e-79 297.0 168 81.0
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.0e-77 293.5 168 80.4
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.3e-77 293.1 168 79.8
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 2.3e-77 292.4 166 78.9
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.3e-77 292.4 168 79.8
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 1.3e-75 286.6 166 80.1
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 1.6e-75 286.2 166 79.5
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 1.6e-75 286.2 166 79.5
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 4.8e-75 284.6 165 78.2
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 6.2e-75 284.3 166 78.3
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 6.2e-75 284.3 167 79.0
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.8e-74 282.7 167 79.0
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 2.4e-74 282.3 165 78.2
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 3.1e-74 282.0 161 81.4
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 4.0e-74 281.6 166 77.1
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.0e-74 281.6 166 77.1
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 6.9e-74 280.8 166 76.5
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 9.0e-74 280.4 166 77.7
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 9.0e-74 280.4 166 78.3
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.0e-74 280.4 166 78.3
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 1.2e-73 280.0 165 80.0
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.2e-73 280.0 166 78.3
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 1.5e-73 279.6 165 77.6
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.5e-73 279.6 166 77.7
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 4.5e-73 278.1 164 77.4
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 5.8e-73 277.7 166 77.7
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 7.6e-73 277.3 166 75.9
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 1.0e-72 276.9 166 76.5
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.0e-72 276.9 166 76.5
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.7e-72 276.2 166 76.5
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 2.2e-72 275.8 166 75.9
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 2.2e-72 275.8 166 74.1
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 2.2e-72 275.8 166 78.3
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 3.8e-72 275.0 164 76.2
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 8.4e-72 273.9 166 75.3
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 8.4e-72 273.9 166 74.1
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 1.9e-71 272.7 164 75.6
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 1.9e-71 272.7 166 75.9
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 2.5e-71 272.3 165 76.4
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 2.5e-71 272.3 166 76.5
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 2.5e-71 272.3 166 75.3
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 3.2e-71 271.9 166 76.5
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 3.2e-71 271.9 166 76.5
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 4.2e-71 271.6 166 77.1
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 4.2e-71 271.6 166 74.1
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 5.5e-71 271.2 164 78.7
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 7.1e-71 270.8 166 75.9
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 7.1e-71 270.8 164 78.0
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 7.1e-71 270.8 166 74.7
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 9.3e-71 270.4 165 75.2
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 2.1e-70 269.2 166 72.3
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 2.1e-70 269.2 166 75.9
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 2.1e-70 269.2 166 74.1
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 2.7e-70 268.9 166 75.3
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 2.7e-70 268.9 166 75.9
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 2.7e-70 268.9 166 75.9
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.7e-70 268.9 165 76.4
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 2.7e-70 268.9 166 74.7
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 6.0e-70 267.7 165 75.2
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 7.9e-70 267.3 167 74.3
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 1.8e-69 266.2 166 77.7
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 3.0e-69 265.4 166 76.5
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 3.9e-69 265.0 166 75.3
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 3.9e-69 265.0 166 71.1
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 5.1e-69 264.6 166 75.3
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 6.7e-69 264.2 166 77.7
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 1.5e-68 263.1 164 75.6
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.9e-68 262.7 166 74.1
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 9.6e-68 260.4 166 74.1
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 1.3e-67 260.0 165 73.3
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 4.1e-66 255.0 166 70.5
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 5.5e-63 244.6 166 70.5
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.1e-62 242.7 147 76.2
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 4.6e-62 241.5 165 66.1
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.8e-61 239.6 163 68.7
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 8.7e-61 237.3 202 59.4
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 4.8e-59 231.5 161 68.3
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 1.2e-57 226.9 261 47.9
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 2.9e-56 222.2 124 81.5
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.8e-53 213.0 117 80.3
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.8e-51 204.9 157 61.1
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 7.7e-49 197.6 146 64.4
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.3e-48 196.8 162 58.0
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 1.7e-48 196.4 106 82.1
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 3.2e-47 192.2 162 56.8
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.5e-44 183.3 158 55.1
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.8e-42 176.4 86 94.2
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.8e-42 176.4 162 53.1
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 1.7e-35 153.3 82 84.1
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 3.1e-34 149.1 80 81.2
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 2.0e-33 146.4 86 77.9
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 6.5e-32 141.4 93 68.8
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 5.5e-31 138.3 85 76.5
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 2.7e-30 136.0 94 69.1
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 4.0e-29 132.1 94 66.0
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 4.4e-28 128.6 85 70.6
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 4.8e-27 125.2 85 68.2
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.4e-26 123.6 85 68.2
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.2e-24 116.3 94 59.6
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.7e-16 90.1 71 66.2
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 4.9e-11 72.0 43 79.1


User provided reference genes

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