Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 6.5e-224 780.4 393 100.0
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 8.3e-195 683.7 392 89.5
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 1.4e-186 656.4 400 86.5
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 7.0e-186 654.1 401 85.8
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 8.9e-165 583.9 401 77.6
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 4.6e-161 571.6 399 76.7
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 1.7e-160 569.7 339 86.1
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.1e-158 562.8 336 85.1
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.8e-157 559.7 407 74.9
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 8.9e-157 557.4 402 73.6
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 4.4e-156 555.1 374 77.3
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.2e-153 547.0 398 72.4
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 1.6e-153 546.6 361 78.9
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 4.6e-153 545.0 385 74.5
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 4.3e-151 538.5 388 73.2
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 9.6e-151 537.3 391 72.6
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-150 537.0 405 71.9
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.8e-150 535.8 372 75.5
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 3.1e-149 532.3 336 80.4
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 8.9e-149 530.8 389 72.0
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-148 530.4 353 77.9
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.4e-148 528.9 341 78.3
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.2e-147 526.2 383 71.0
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.2e-147 526.2 398 69.3
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 8.4e-147 524.2 339 78.2
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 4.2e-146 521.9 333 79.6
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 9.3e-146 520.8 395 69.1
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 2.1e-145 519.6 398 68.3
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.6e-145 518.5 347 76.1
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 6.0e-145 518.1 347 75.8
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 7.8e-145 517.7 405 67.9
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 1.3e-144 516.9 403 67.5
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 3.0e-144 515.8 382 70.4
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 3.9e-144 515.4 414 66.9
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.1e-143 513.8 393 69.7
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.9e-143 513.1 349 75.1
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 2.5e-143 512.7 406 67.0
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 4.3e-143 511.9 348 75.3
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 5.6e-143 511.5 390 68.5
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 2.1e-142 509.6 418 67.0
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 4.8e-142 508.4 399 67.7
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 6.2e-142 508.1 374 72.2
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 6.2e-142 508.1 403 66.5
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.1e-142 507.7 366 71.9
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.1e-142 507.7 366 71.9
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.4e-141 506.9 326 79.1
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 5.3e-141 505.0 357 72.8
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 5.3e-141 505.0 400 66.8
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.2e-140 503.8 327 78.0
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.2e-140 503.8 351 73.5
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 2.0e-140 503.1 406 66.7
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 2.9e-139 499.2 401 66.6
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 3.8e-139 498.8 356 70.2
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.8e-136 490.0 356 69.7
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 5.1e-136 488.4 374 68.7
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.5e-135 486.9 328 74.1
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.5e-135 486.9 399 65.4
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 1.9e-135 486.5 341 71.0
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 2.5e-135 486.1 411 63.3
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 2.5e-135 486.1 347 70.3
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 8.1e-134 481.1 300 79.3
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 8.1e-134 481.1 527 54.5
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 2.9e-131 472.6 355 69.3
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 3.8e-131 472.2 326 69.6
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 3.8e-131 472.2 326 69.6
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 3.8e-131 472.2 384 63.3
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.8e-131 472.2 332 68.7
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 2.4e-130 469.5 384 64.3
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 4.2e-130 468.8 326 69.3
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 7.1e-130 468.0 361 67.9
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 7.1e-130 468.0 326 68.7
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 9.3e-130 467.6 384 64.1
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.2e-129 467.2 324 71.0
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.1e-129 466.5 323 70.9
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 3.5e-129 465.7 370 64.9
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 3.5e-129 465.7 374 63.1
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 7.9e-129 464.5 356 66.9
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 3.9e-128 462.2 407 59.7
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.5e-127 460.3 408 59.8
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.5e-127 460.3 407 59.5
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 1.9e-127 459.9 337 69.4
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 1.3e-126 457.2 532 51.3
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 6.2e-126 454.9 349 67.3
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 2.2e-123 446.4 342 68.1
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 3.8e-123 445.7 326 69.0
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 1.4e-122 443.7 334 65.6
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.5e-122 443.0 364 61.5
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.5e-122 443.0 364 61.5
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 3.2e-122 442.6 391 60.1
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 5.5e-122 441.8 363 61.7
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 1.6e-121 440.3 364 60.7
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.6e-121 440.3 368 64.9
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 2.1e-121 439.9 326 69.3
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 3.5e-121 439.1 347 66.6
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 1.1e-119 434.1 335 63.3
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 1.3e-118 430.6 431 57.8
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 3.7e-118 429.1 401 59.4
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 4.8e-118 428.7 381 60.6
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.7e-115 420.2 226 91.2
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 2.1e-113 413.3 386 58.8
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 8.7e-112 407.9 373 56.6
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 5.7e-111 405.2 226 86.7
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 4.8e-110 402.1 282 71.6
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.5e-108 397.1 327 65.4
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 7.7e-108 394.8 297 67.3
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 5.0e-107 392.1 220 84.1
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 5.0e-107 392.1 277 69.3
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 2.7e-105 386.3 316 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 2.0e-100 370.2 284 64.8
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 3.0e-96 356.3 270 66.3
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 1.7e-94 350.5 259 64.1
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 3.7e-94 349.4 278 66.2
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 2.4e-93 346.7 554 40.6
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 3.8e-91 339.3 223 81.6
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 2.5e-90 336.7 198 78.3
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 2.6e-87 326.6 232 73.3
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 6.3e-86 322.0 216 73.1
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 3.1e-85 319.7 290 64.5
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 5.5e-82 308.9 215 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.5e-79 300.8 282 55.3
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.2e-78 297.0 342 52.9
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.8e-72 277.3 226 61.1
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 7.0e-69 265.4 241 64.7
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.9e-43 179.9 243 42.4
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 9.5e-42 175.3 258 38.0
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 3.2e-29 133.7 286 32.9
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 9.6e-26 122.1 176 42.0
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.8e-24 117.9 89 68.5
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.5e-23 114.8 122 53.3
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.7e-22 111.3 110 60.9
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 4.2e-21 106.7 157 43.3
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 4.6e-20 103.2 132 51.5
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 6.0e-20 102.8 110 58.2
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-19 100.9 88 62.5
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-18 98.2 88 62.5
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.9e-18 97.8 136 49.3
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.3e-18 96.7 75 69.3
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.3e-18 96.7 75 69.3
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-17 95.1 76 67.1
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.1e-17 94.4 66 71.2
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.0e-16 90.1 66 68.2
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 1.2e-15 88.6 49 91.8
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 1.1e-13 82.0 170 30.6
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.5e-12 77.0 166 31.9
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 4.6e-12 76.6 156 35.3
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 1.9e-10 71.2 170 31.2
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 3.3e-10 70.5 195 33.8


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