Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 8.2e-188 660.2 331 100.0
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.6e-173 612.1 331 91.8
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 6.6e-169 597.4 331 90.0
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.8e-166 589.3 331 88.2
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.7e-164 582.8 331 86.7
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 5.4e-163 577.8 331 86.4
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.7e-161 572.8 331 83.4
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 2.9e-161 572.0 331 84.9
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 3.6e-159 565.1 330 83.0
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 3.6e-159 565.1 331 85.2
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.7e-154 548.9 329 79.9
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.0e-153 547.0 329 80.2
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.3e-153 545.8 328 80.5
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 6.6e-153 544.3 328 80.2
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.9e-152 542.7 327 79.5
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 4.3e-152 541.6 329 79.9
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 5.6e-152 541.2 329 79.3
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 9.5e-152 540.4 329 77.8
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 1.6e-151 539.7 329 78.1
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 1.6e-151 539.7 329 78.1
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 3.6e-151 538.5 326 79.4
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 4.7e-151 538.1 328 79.3
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.3e-150 535.8 329 77.2
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.1e-150 535.4 329 78.4
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.1e-150 535.4 329 79.9
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 5.2e-150 534.6 329 77.8
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 6.8e-150 534.3 329 78.7
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 8.9e-150 533.9 327 78.6
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.2e-149 533.5 331 79.2
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.5e-149 533.1 329 78.7
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.5e-149 533.1 329 77.5
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 3.4e-149 531.9 328 78.4
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 4.4e-149 531.6 331 78.9
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 5.8e-149 531.2 329 78.4
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.3e-148 530.0 328 76.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 2.2e-148 529.3 329 78.4
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 3.7e-148 528.5 330 77.6
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 8.3e-148 527.3 329 75.1
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.1e-147 526.9 327 77.7
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.4e-147 526.6 329 76.6
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 1.9e-147 526.2 331 75.8
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.9e-147 526.2 329 76.9
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.4e-147 525.8 329 78.1
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 9.2e-147 523.9 329 76.3
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 9.2e-147 523.9 327 77.1
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.2e-146 523.5 327 75.8
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-146 523.5 329 76.6
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.2e-146 523.5 329 76.3
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 2.1e-146 522.7 329 76.3
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.5e-146 521.9 326 76.7
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 3.5e-146 521.9 329 76.6
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 6.0e-146 521.2 329 76.0
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 7.8e-146 520.8 329 74.8
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 7.8e-146 520.8 332 78.0
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.0e-145 520.4 330 75.5
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.7e-145 519.6 329 75.1
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.7e-145 519.6 326 74.8
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.3e-145 519.2 326 77.3
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.3e-145 519.2 345 74.5
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 6.6e-145 517.7 326 77.0
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 6.6e-145 517.7 329 76.0
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 1.1e-144 516.9 330 75.5
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 1.1e-144 516.9 330 75.5
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.5e-144 516.5 330 75.5
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 4.3e-144 515.0 329 76.3
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 4.3e-144 515.0 329 75.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 4.3e-144 515.0 329 75.4
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 5.6e-144 514.6 330 75.5
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 7.3e-144 514.2 330 74.8
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 9.5e-144 513.8 330 75.2
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.2e-143 513.5 330 76.1
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.2e-143 513.5 329 76.3
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 2.1e-143 512.7 329 74.2
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 2.1e-143 512.7 330 75.8
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.8e-143 512.3 329 75.1
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.6e-143 511.9 329 74.8
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 8.1e-143 510.8 329 73.9
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.4e-142 510.0 324 77.5
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.3e-142 509.2 329 75.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 3.1e-142 508.8 313 76.0
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 3.1e-142 508.8 327 75.5
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.0e-142 508.4 329 74.5
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 1.1e-139 500.4 329 75.1
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 9.2e-139 497.3 402 63.7
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.6e-138 496.5 360 68.3
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 4.6e-138 495.0 360 68.3
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.9e-136 489.6 330 72.4
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-135 486.9 329 70.5
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 8.1e-135 484.2 317 74.8
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 5.2e-134 481.5 348 69.0
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.1e-131 473.8 327 70.6
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.1e-130 469.5 329 69.0
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 2.1e-127 459.5 329 69.3
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.2e-122 443.7 284 76.4
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.7e-122 442.6 329 65.7
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 5.5e-115 418.3 329 64.1
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 6.7e-113 411.4 345 63.5
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.9e-112 409.8 333 61.0
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 4.8e-111 405.2 353 60.3
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.4e-110 403.7 284 71.1
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 9.0e-110 401.0 328 61.6
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 3.4e-109 399.1 270 70.0
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 6.5e-108 394.8 225 84.0
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.1e-103 379.8 333 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.1e-99 367.5 325 55.7
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.3e-99 364.4 329 56.2
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.1e-98 361.7 329 56.2
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.3e-97 360.5 223 79.4
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 8.2e-95 351.3 332 54.2
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-93 347.1 330 52.4
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-93 345.9 332 54.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 5.9e-93 345.1 333 54.4
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 7.7e-93 344.7 330 52.4
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-92 342.4 330 53.6
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-90 337.0 331 54.1
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 4.6e-90 335.5 218 76.1
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 5.1e-89 332.0 326 53.7
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-88 330.9 332 53.3
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-86 324.3 329 52.0
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-86 324.3 330 50.6
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-86 324.3 329 51.1
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-86 323.9 330 50.6
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-86 323.9 331 51.7
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.2e-83 312.4 329 50.5
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.0e-81 307.8 233 67.8
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 2.8e-79 299.7 329 48.3
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-78 297.4 330 47.6
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-76 290.4 330 47.6
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.8e-76 289.3 326 47.2
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-68 264.6 264 51.1
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 9.1e-62 241.5 148 77.0
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 4.5e-61 239.2 147 78.2
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 4.2e-59 232.6 173 73.4
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-57 227.6 216 54.6
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.0e-57 226.5 181 66.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 2.0e-56 223.8 141 75.2
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 2.5e-51 206.8 129 79.8
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-49 199.5 195 51.8
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 8.9e-49 198.4 177 53.7
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.4e-48 196.4 328 39.9
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 2.7e-45 186.8 213 50.2
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 2.5e-43 180.3 136 69.1
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 7.3e-43 178.7 158 60.1
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-42 177.9 105 81.0
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.9e-35 154.1 366 33.1
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 6.4e-31 139.0 351 31.1
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 2.1e-26 124.0 79 73.4
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.4e-25 121.3 329 28.9
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 2.3e-25 120.6 291 30.6
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.0e-25 119.8 346 29.2
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 4.0e-25 119.8 69 76.8
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-23 113.6 98 55.1
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-18 97.8 59 81.4
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.6e-18 97.8 365 27.4
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 2.1e-18 97.4 72 66.7
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.1e-17 95.1 330 30.9
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 5.8e-16 89.4 189 34.4
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.9e-15 87.0 56 76.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.8e-15 86.7 86 54.7
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 2.1e-13 80.9 65 61.5
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.5e-11 73.9 148 37.8
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.3e-11 73.6 45 73.3
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.6e-10 71.2 48 68.8
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 4.8e-10 69.7 46 73.9
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 6.2e-10 69.3 47 74.5
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 1.8e-09 67.8 50 68.0
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 9.0e-09 65.5 127 35.4
Phvul.003G083100 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 3.4e-08 63.5 33 93.9


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