Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 5.1e-110 401.0 187 100.0
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 1.3e-97 359.8 192 87.5
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 9.3e-96 353.6 187 89.3
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 2.1e-92 342.4 192 81.2
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 4.8e-92 341.3 192 80.7
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 4.8e-92 341.3 192 80.7
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 1.2e-90 336.7 192 80.2
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 1.0e-89 333.6 192 79.7
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 1.7e-89 332.8 192 79.2
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 2.9e-89 332.0 186 81.2
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 2.9e-89 332.0 190 79.5
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 3.0e-86 322.0 191 77.0
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 5.1e-86 321.2 184 78.8
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 8.7e-86 320.5 194 76.8
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 8.7e-86 320.5 192 75.5
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 1.9e-85 319.3 182 79.1
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 2.5e-85 318.9 191 74.9
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 3.3e-85 318.5 192 75.0
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 5.7e-85 317.8 184 77.7
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 9.7e-85 317.0 191 75.4
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 9.7e-85 317.0 186 75.8
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 2.2e-84 315.8 191 74.3
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 2.2e-84 315.8 185 76.8
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 3.7e-84 315.1 184 76.6
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 4.8e-84 314.7 191 74.9
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 4.8e-84 314.7 187 75.4
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 4.1e-83 311.6 188 75.0
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.1e-83 311.6 192 73.4
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 5.3e-83 311.2 169 81.7
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 5.3e-83 311.2 192 72.9
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 9.0e-83 310.5 191 73.8
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 9.0e-83 310.5 187 74.9
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 1.2e-82 310.1 186 75.8
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 1.2e-82 310.1 186 75.8
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 1.2e-82 310.1 191 73.8
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 1.5e-82 309.7 188 75.0
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 2.0e-82 309.3 186 76.9
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.6e-82 308.9 188 75.0
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 3.4e-82 308.5 189 71.4
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 7.7e-82 307.4 192 72.4
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 7.7e-82 307.4 187 75.4
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 7.7e-82 307.4 183 76.0
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.3e-81 306.6 183 75.4
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 1.7e-81 306.2 186 73.7
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 2.9e-81 305.4 184 74.5
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 2.9e-81 305.4 185 73.5
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 2.9e-81 305.4 183 74.3
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 3.8e-81 305.1 183 75.4
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 5.0e-81 304.7 173 79.8
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 6.5e-81 304.3 182 74.2
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 8.5e-81 303.9 187 75.4
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 1.1e-80 303.5 186 74.2
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 1.9e-80 302.8 184 75.0
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 2.5e-80 302.4 182 74.2
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 2.5e-80 302.4 183 74.9
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 4.2e-80 301.6 185 74.1
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 5.5e-80 301.2 187 74.3
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 7.2e-80 300.8 186 73.7
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 9.4e-80 300.4 185 73.0
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.2e-79 300.1 189 73.5
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 7.9e-79 297.4 183 73.8
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.4e-78 296.6 186 72.0
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 1.4e-78 296.6 182 74.7
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.4e-78 296.6 184 72.8
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 3.9e-78 295.0 187 71.1
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 3.9e-78 295.0 184 73.9
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 5.1e-78 294.7 183 73.8
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 8.8e-78 293.9 184 71.7
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 8.8e-78 293.9 183 73.8
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 5.7e-77 291.2 172 76.7
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 5.7e-77 291.2 168 76.8
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 5.7e-77 291.2 185 71.4
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 9.7e-77 290.4 171 75.4
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 1.7e-76 289.7 169 75.7
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 2.2e-76 289.3 169 76.3
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 2.2e-76 289.3 169 76.3
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 2.2e-76 289.3 170 75.3
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 2.8e-76 288.9 184 71.7
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 2.8e-76 288.9 185 70.8
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 6.3e-76 287.7 183 71.6
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 6.3e-76 287.7 171 73.7
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 8.2e-76 287.3 169 75.7
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 8.2e-76 287.3 169 75.7
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 8.2e-76 287.3 169 75.1
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 8.2e-76 287.3 182 72.0
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 1.4e-75 286.6 169 75.7
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 2.0e-74 282.7 183 68.9
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 2.6e-74 282.3 160 79.4
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 5.9e-74 281.2 183 69.9
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.7e-73 279.6 169 73.4
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.4e-72 276.6 192 67.7
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 3.0e-70 268.9 187 68.4
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 3.9e-70 268.5 170 69.4
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 2.8e-68 262.3 190 63.7
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 8.2e-68 260.8 183 61.7
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 1.1e-67 260.4 151 76.8
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 4.1e-67 258.5 171 73.7
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 7.7e-66 254.2 143 77.6
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 1.1e-64 250.4 170 63.5
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.5e-64 250.0 143 76.2
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 3.2e-64 248.8 130 86.9
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 2.1e-63 246.1 170 64.7
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 8.2e-60 234.2 161 66.5
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 6.8e-54 214.5 201 51.2
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.2e-53 213.8 187 55.6
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 4.4e-53 211.8 164 57.9
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 1.9e-48 196.4 105 81.9
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 1.5e-45 186.8 162 54.3
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 4.7e-39 165.2 185 43.8
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 5.2e-38 161.8 89 82.0
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 1.2e-31 140.6 70 88.6
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 8.9e-22 107.8 86 55.8
Haze_08452 Corylus avellana HOM05D014029 ORTHO05D044818 1.0e-17 94.4 73 56.2
Hma1.2p1_0696F.1_g204670 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 1.8e-06 57.0 35 62.9


User provided reference genes

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