Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 5.8e-139 497.7 272 100.0
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 1.3e-133 479.9 272 95.6
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.9e-126 456.1 269 84.4
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 6.2e-125 451.1 272 83.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 4.8e-117 424.9 276 79.3
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 1.4e-113 413.3 274 76.6
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.8e-111 406.4 275 76.7
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 2.5e-110 402.5 273 75.5
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.2e-107 393.7 283 74.2
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.3e-103 379.4 275 70.9
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 3.4e-99 365.5 274 67.9
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 4.5e-99 365.2 282 68.8
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 7.7e-99 364.4 272 68.0
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 7.7e-99 364.4 276 66.3
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 7.7e-99 364.4 267 68.5
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.0e-98 364.0 276 66.3
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.3e-98 363.6 226 77.4
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 3.8e-98 362.1 280 66.1
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 8.5e-98 360.9 275 67.6
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.2e-97 359.0 276 66.3
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 6.1e-96 354.8 292 65.4
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 2.3e-95 352.8 271 64.6
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.9e-95 352.1 275 65.5
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 1.5e-94 350.1 214 79.4
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 9.7e-94 347.4 284 63.4
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 9.7e-94 347.4 225 70.7
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.3e-93 347.1 291 62.2
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.3e-93 347.1 275 62.9
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.7e-93 346.7 277 66.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.8e-92 343.2 271 67.2
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.4e-92 342.8 276 65.2
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.4e-92 342.8 277 65.0
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 3.1e-92 342.4 270 62.2
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.1e-92 342.4 274 62.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.1e-92 342.0 277 65.7
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 9.1e-92 340.9 269 63.9
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.0e-91 339.7 327 56.6
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 3.5e-91 339.0 299 62.2
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 5.9e-91 338.2 275 62.2
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 5.9e-91 338.2 277 65.0
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.3e-90 337.0 225 69.3
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.7e-90 336.7 230 69.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.9e-90 335.9 221 70.6
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.8e-90 335.5 291 61.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 3.8e-90 335.5 309 58.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 5.0e-90 335.1 306 58.8
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.5e-89 333.6 223 70.0
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.5e-89 333.6 223 70.0
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.9e-89 333.2 223 70.0
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 3.2e-89 332.4 223 69.1
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 4.2e-89 332.0 275 61.5
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 2.1e-88 329.7 225 70.7
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 6.1e-88 328.2 274 63.5
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 8.0e-88 327.8 265 62.3
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.0e-87 327.4 276 61.6
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 4.0e-87 325.5 286 59.8
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 4.0e-87 325.5 358 53.4
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 8.8e-87 324.3 279 60.9
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 8.8e-87 324.3 283 61.5
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 2.0e-86 323.2 278 61.2
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 2.0e-86 323.2 280 60.7
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.6e-86 322.8 273 61.2
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.6e-86 322.8 280 60.7
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 5.7e-86 321.6 209 71.8
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 9.7e-86 320.9 275 60.0
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.7e-85 320.1 219 76.3
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.7e-85 320.1 211 70.6
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.2e-85 319.7 273 61.5
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.7e-85 318.9 253 64.0
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.4e-84 317.0 318 55.7
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 7.0e-84 314.7 230 67.4
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 3.5e-83 312.4 265 62.6
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 7.7e-83 311.2 270 60.0
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.2e-82 309.7 223 70.0
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 8.5e-82 307.8 277 58.8
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.6e-80 303.5 222 68.5
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 6.8e-79 298.1 279 57.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.4e-78 295.8 275 58.2
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.3e-77 293.9 276 58.3
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.3e-77 293.9 276 59.8
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.2e-77 293.1 279 58.1
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 9.1e-76 287.7 182 75.3
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.3e-74 283.9 202 69.3
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.7e-74 283.5 189 72.5
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.8e-74 282.3 194 75.3
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 3.6e-72 275.8 228 61.8
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 8.0e-72 274.6 191 70.7
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 8.0e-72 274.6 227 62.6
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 5.2e-71 271.9 234 58.5
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 6.3e-69 265.0 225 59.6
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.4e-68 263.8 147 80.3
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 1.8e-68 263.5 147 79.6
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.3e-66 256.5 207 58.5
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 8.6e-66 254.6 213 56.8
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.1e-65 254.2 266 53.4
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 9.5e-65 251.1 200 62.5
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 2.8e-64 249.6 220 57.3
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 2.0e-62 243.4 248 48.0
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.5e-57 227.3 146 72.6
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 4.0e-55 219.2 217 47.9
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 5.8e-54 215.3 291 45.4
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 7.5e-54 214.9 180 54.4
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 4.9e-53 212.2 195 51.8
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 6.4e-53 211.8 210 51.9
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 6.8e-47 191.8 136 72.1
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 9.8e-46 188.0 187 57.2
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.1e-39 167.9 218 39.0
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 5.6e-33 145.6 191 45.5
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.4e-28 131.0 107 61.7
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-27 127.9 221 38.5
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 3.8e-21 106.3 55 83.6
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 4.9e-21 105.9 63 79.4
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 9.3e-20 101.7 59 74.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 9.3e-20 101.7 90 56.7
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 7.9e-19 98.6 94 56.4
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.0e-18 98.2 100 54.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.0e-15 86.3 78 59.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 5.5e-12 75.9 89 40.4
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 6.7e-10 68.9 97 44.3
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 4.8e-08 62.8 80 41.2


User provided reference genes

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