Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 8.2e-44 179.9 83 100.0
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 1.1e-32 142.9 83 78.3
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 1.1e-29 132.9 83 72.3
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 2.4e-27 125.2 83 68.7
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 7.0e-27 123.6 83 69.9
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 7.7e-26 120.2 84 65.5
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 5.0e-25 117.5 85 64.7
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 1.1e-24 116.3 83 67.5
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 5.5e-24 114.0 83 65.1
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 7.2e-24 113.6 82 63.4
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 4.7e-23 110.9 83 59.0
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 1.4e-22 109.4 83 62.7
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 1.1e-21 106.3 83 61.4
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 1.5e-21 105.9 85 64.7
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 9.7e-21 103.2 83 54.2
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.1e-19 96.7 85 54.1
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.1e-19 96.7 85 54.1
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 2.7e-18 95.1 85 58.8
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 1.7e-17 92.4 83 56.6
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 2.9e-17 91.7 69 63.8
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 3.8e-17 91.3 83 54.2
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 5.0e-17 90.9 85 55.3
TPR.G17065 Trifolium pratense HOM05D009245 ORTHO05D011414 6.5e-17 90.5 67 64.2
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 2.5e-16 88.6 83 55.4
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.6e-15 85.9 84 53.6
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 3.6e-15 84.7 45 80.0
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 8.0e-15 83.6 84 52.4
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 4.0e-14 81.3 84 54.8
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 3.4e-13 78.2 45 75.6
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 1.2e-10 69.7 79 46.8
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 3.5e-10 68.2 83 43.4
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 4.5e-10 67.8 83 42.2
EL10Ac6g13482 Beta vulgaris HOM05D009245 ORTHO05D011414 4.2e-08 61.2 90 42.2
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 4.2e-08 61.2 51 58.8
Lj3A1066T76 Lonicera japonica HOM05D000667 ORTHO05D003843 3.6e-07 58.2 81 40.7


User provided reference genes

Program Settings