Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 2.6e-206 721.8 367 100.0
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 3.4e-190 668.3 390 89.2
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 3.0e-162 575.5 380 80.8
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 3.0e-162 575.5 380 80.8
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 2.3e-154 549.3 380 76.6
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 8.6e-154 547.4 386 75.6
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 9.5e-153 543.9 386 74.6
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 1.6e-152 543.1 384 75.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 5.2e-143 511.5 391 68.8
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 1.7e-141 506.5 388 68.8
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.9e-140 503.1 394 69.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 3.5e-139 498.8 392 68.4
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 1.1e-137 493.8 389 68.4
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.3e-137 491.9 379 66.8
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 9.0e-135 484.2 392 67.9
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 7.6e-134 481.1 367 73.6
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 9.9e-134 480.7 393 65.9
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 9.9e-134 480.7 370 72.2
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.9e-132 476.5 398 64.6
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.4e-132 476.1 377 65.8
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 7.1e-132 474.6 389 66.1
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.6e-131 473.4 393 66.7
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 8.7e-130 467.6 394 64.7
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.1e-129 467.2 386 67.1
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 3.3e-129 465.7 368 68.2
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 3.3e-129 465.7 410 62.9
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.6e-128 463.4 392 64.0
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.6e-128 463.4 389 64.3
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 6.2e-128 461.5 389 64.3
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.4e-127 460.3 400 62.2
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.4e-127 459.5 393 63.9
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 4.0e-127 458.8 392 63.5
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.2e-126 457.2 403 63.5
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 5.1e-122 441.8 369 64.2
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 5.1e-122 441.8 354 65.5
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 4.3e-121 438.7 386 64.0
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.3e-120 437.2 449 56.6
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 3.7e-120 435.6 394 60.7
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 8.2e-120 434.5 390 60.5
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.8e-119 433.3 404 60.9
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 5.3e-119 431.8 389 62.0
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 1.2e-118 430.6 391 59.6
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 4.9e-117 425.2 393 60.3
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.2e-115 420.6 391 60.4
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.0e-114 417.5 364 61.3
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 6.7e-114 414.8 373 62.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.5e-113 413.7 386 60.1
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.5e-113 413.7 386 59.8
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.9e-113 413.3 408 58.3
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.5e-113 412.9 408 58.6
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 5.7e-113 411.8 391 59.6
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 1.6e-112 410.2 391 59.3
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 2.1e-112 409.8 416 57.0
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.1e-112 409.8 408 58.1
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.1e-112 409.8 391 59.8
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 8.2e-112 407.9 388 58.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 4.1e-111 405.6 305 72.1
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 6.9e-111 404.8 392 59.9
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.2e-110 404.1 392 59.7
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 4.5e-110 402.1 380 59.2
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 5.0e-109 398.7 401 58.4
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 1.9e-108 396.7 403 56.8
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 3.6e-107 392.5 393 55.7
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 7.9e-107 391.3 398 56.8
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.5e-105 386.3 385 55.1
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.6e-104 383.6 364 59.1
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 3.7e-104 382.5 383 56.4
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.1e-103 380.9 397 55.9
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.1e-103 380.9 250 76.8
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.8e-103 380.2 250 77.6
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 7.7e-102 374.8 391 54.7
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.3e-101 374.0 370 54.9
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 5.0e-101 372.1 393 55.0
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 8.5e-101 371.3 397 54.9
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.1e-100 370.9 392 54.8
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.5e-100 369.8 405 52.1
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 3.2e-100 369.4 395 55.4
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.0e-98 364.4 396 53.3
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.4e-98 364.0 389 55.3
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 5.1e-98 362.1 392 54.6
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 5.1e-98 362.1 396 52.8
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.3e-97 359.4 253 70.8
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.7e-96 357.1 247 72.5
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 2.4e-95 353.2 449 47.4
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.6e-94 349.7 395 54.2
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.8e-93 345.9 383 55.4
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 5.0e-93 345.5 402 51.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 3.2e-92 342.8 250 68.8
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.8e-90 337.0 236 73.3
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-87 327.0 351 54.1
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 2.4e-87 326.6 258 65.1
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 2.2e-77 293.5 365 49.0
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 1.8e-71 273.9 374 44.9
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.6e-70 270.8 209 67.5
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.7e-70 270.0 416 44.5
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 5.9e-70 268.9 347 44.4
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.1e-63 246.5 155 78.7
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 9.2e-63 245.0 397 40.8
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 5.9e-62 242.3 418 39.2
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 1.9e-60 237.3 359 44.0
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 5.7e-57 225.7 339 41.9
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 1.1e-52 211.5 209 49.8
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 7.3e-52 208.8 153 74.5
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.7e-48 196.4 391 39.4
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 5.8e-41 172.6 145 65.5
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.7e-29 134.4 147 45.6
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.3e-21 108.2 175 42.3
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 1.1e-15 88.6 161 38.5
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 6.2e-11 72.8 46 71.7
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 5.5e-07 59.7 48 58.3


User provided reference genes

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