Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 5.9e-39 163.7 81 100.0
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 5.9e-39 163.7 81 100.0
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 3.2e-37 157.9 81 95.1
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 7.2e-37 156.8 81 93.8
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 9.5e-37 156.4 81 93.8
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 3.6e-36 154.5 80 95.0
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 4.0e-35 151.0 79 92.4
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 8.8e-35 149.8 80 90.0
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 8.8e-35 149.8 80 90.0
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 8.8e-35 149.8 80 88.8
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 1.2e-34 149.4 81 88.9
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 2.0e-34 148.7 81 90.1
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 4.4e-34 147.5 79 88.6
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 7.5e-34 146.7 80 87.5
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 1.3e-33 146.0 79 87.3
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 1.3e-33 146.0 75 94.7
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.3e-33 146.0 81 85.2
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.3e-33 146.0 81 87.7
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.7e-33 145.6 80 85.0
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.7e-33 145.6 80 85.0
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.7e-33 145.6 80 85.0
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.7e-33 145.6 80 85.0
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.7e-33 145.6 80 85.0
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 2.2e-33 145.2 79 86.1
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 2.2e-33 145.2 80 86.2
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 2.8e-33 144.8 80 83.8
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 3.7e-33 144.4 77 88.3
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 3.7e-33 144.4 79 86.1
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 3.7e-33 144.4 77 87.0
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 6.3e-33 143.7 80 85.0
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 6.3e-33 143.7 79 84.8
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 8.3e-33 143.3 78 85.9
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 8.3e-33 143.3 79 84.8
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 1.1e-32 142.9 80 83.8
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 1.4e-32 142.5 79 84.8
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 1.8e-32 142.1 79 84.8
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 1.8e-32 142.1 79 83.5
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 2.4e-32 141.7 75 88.0
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 2.4e-32 141.7 80 82.5
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 5.4e-32 140.6 80 81.2
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 5.4e-32 140.6 76 85.5
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 5.4e-32 140.6 76 86.8
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 7.0e-32 140.2 77 84.4
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 9.2e-32 139.8 73 89.0
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 9.2e-32 139.8 77 83.1
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 9.2e-32 139.8 77 84.4
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 1.2e-31 139.4 74 87.8
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.2e-31 139.4 80 80.0
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 1.6e-31 139.0 77 84.4
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 2.0e-31 138.7 73 89.0
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 2.0e-31 138.7 80 80.0
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 2.7e-31 138.3 77 81.8
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 2.7e-31 138.3 72 90.3
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 2.7e-31 138.3 80 81.2
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 3.5e-31 137.9 78 79.5
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 3.5e-31 137.9 72 90.3
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 5.9e-31 137.1 73 87.7
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 7.8e-31 136.7 72 87.5
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 1.0e-30 136.3 72 87.5
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 1.0e-30 136.3 80 80.0
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 1.7e-30 135.6 80 80.0
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.7e-30 135.6 80 78.8
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 2.3e-30 135.2 80 80.0
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 2.3e-30 135.2 80 77.5
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 2.3e-30 135.2 80 80.0
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 2.3e-30 135.2 80 78.8
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 2.3e-30 135.2 72 86.1
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 2.9e-30 134.8 80 78.8
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 2.9e-30 134.8 80 78.8
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 2.9e-30 134.8 80 78.8
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 2.9e-30 134.8 80 78.8
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 2.9e-30 134.8 72 87.5
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 2.9e-30 134.8 72 87.5
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 2.9e-30 134.8 73 84.9
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 3.8e-30 134.4 80 78.8
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 5.0e-30 134.0 80 78.8
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 6.6e-30 133.7 72 84.7
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 8.6e-30 133.3 73 83.6
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 8.6e-30 133.3 77 77.9
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 1.1e-29 132.9 80 76.2
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 1.5e-29 132.5 80 78.8
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 2.5e-29 131.7 73 82.2
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 3.3e-29 131.3 80 75.0
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 3.3e-29 131.3 80 76.2
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 4.3e-29 131.0 78 75.6
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 4.3e-29 131.0 80 75.0
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 7.3e-29 130.2 73 80.8
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 7.3e-29 130.2 80 73.8
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 9.5e-29 129.8 80 75.0
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 1.2e-28 129.4 73 80.8
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 1.2e-28 129.4 73 80.8
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.2e-28 129.4 72 84.7
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.2e-28 129.4 78 75.6
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 1.6e-28 129.0 79 72.2
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 2.1e-28 128.6 73 79.5
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 3.6e-28 127.9 78 75.6
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 8.0e-28 126.7 73 78.1
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 2.3e-27 125.2 74 77.0
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 2.3e-27 125.2 75 74.7
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 3.0e-27 124.8 72 77.8
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 3.0e-27 124.8 71 80.3
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 6.8e-27 123.6 72 77.8
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 6.8e-27 123.6 70 80.0
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 6.8e-27 123.6 75 73.3
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 6.8e-27 123.6 71 78.9
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 8.9e-27 123.2 72 77.8
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 8.9e-27 123.2 81 71.6
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 2.6e-26 121.7 69 76.8
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 3.4e-26 121.3 72 77.8
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 2.2e-25 118.6 80 72.5
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.1e-24 116.3 78 65.4
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 1.2e-23 112.8 73 67.1
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 1.6e-23 112.5 74 68.9
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 9.5e-21 103.2 78 52.6
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 8.9e-19 96.7 77 53.2
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 1.2e-18 96.3 73 56.2
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 3.7e-17 91.3 73 53.4
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 6.4e-17 90.5 73 52.1
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 1.6e-15 85.9 49 71.4
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 2.7e-15 85.1 71 50.7
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 5.6e-13 77.4 72 47.2
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 6.2e-12 73.9 69 47.8
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 8.1e-12 73.6 49 67.3
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 4.0e-11 71.2 66 57.6
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 5.8e-10 67.4 37 78.4
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.4e-08 62.8 37 75.7


User provided reference genes

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