Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 6.3e-168 594.0 287 100.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.8e-146 522.7 287 85.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 3.4e-145 518.5 287 84.3
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 7.5e-145 517.3 287 84.3
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.1e-143 513.5 287 83.3
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.7e-142 508.8 287 82.9
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 3.6e-139 498.4 288 81.9
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.8e-138 496.1 286 81.8
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.0e-133 480.3 287 78.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 2.3e-133 479.2 288 78.8
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.5e-132 475.7 286 77.3
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 5.6e-132 474.6 285 77.2
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 7.3e-132 474.2 287 77.0
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 9.5e-132 473.8 287 74.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 9.5e-132 473.8 286 76.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.6e-131 473.0 284 76.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.8e-131 472.2 287 76.7
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 6.1e-131 471.1 287 76.3
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.0e-130 470.3 287 77.4
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.4e-130 469.9 284 76.1
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.8e-130 469.5 287 76.3
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 8.9e-130 467.2 287 74.9
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.6e-129 465.7 284 76.4
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 4.4e-129 464.9 284 75.0
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.4e-129 464.9 284 75.4
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 5.8e-129 464.5 285 75.8
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.4e-127 459.9 284 75.4
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.9e-127 459.5 287 75.6
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.4e-127 458.0 287 74.6
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 7.0e-127 457.6 284 74.3
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 9.2e-127 457.2 285 73.3
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.7e-126 455.7 284 73.6
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 2.7e-126 455.7 287 73.9
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.5e-126 455.3 284 73.2
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 3.5e-126 455.3 272 76.8
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 7.8e-126 454.1 298 71.1
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-125 453.8 285 73.0
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.0e-125 451.4 294 70.7
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.0e-125 451.4 285 73.3
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 6.6e-125 451.1 287 73.9
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.5e-124 449.9 283 77.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.5e-124 449.9 291 70.8
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 3.3e-124 448.7 282 73.4
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.3e-124 448.7 271 77.5
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 3.3e-124 448.7 287 72.5
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 5.6e-124 448.0 285 74.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.5e-124 447.2 287 73.5
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.5e-124 447.2 287 73.5
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.6e-123 446.4 287 73.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.7e-123 444.9 285 76.1
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.1e-122 443.7 287 71.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.8e-122 441.0 275 73.5
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.6e-121 439.1 287 70.7
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.6e-121 439.1 285 71.9
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 3.4e-121 438.7 286 70.6
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 3.4e-121 438.7 286 71.0
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 5.8e-121 438.0 286 70.6
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 7.5e-121 437.6 286 70.6
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.7e-120 436.4 287 69.7
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 2.2e-120 436.0 287 69.3
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 6.4e-120 434.5 288 68.4
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 6.4e-120 434.5 309 66.0
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 8.3e-120 434.1 286 70.6
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 8.3e-120 434.1 288 68.4
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.1e-119 433.7 285 69.5
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.4e-119 433.3 287 70.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.9e-119 433.0 280 71.4
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.2e-119 432.2 287 67.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 5.4e-119 431.4 286 68.9
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 7.0e-119 431.0 285 69.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 9.2e-119 430.6 284 69.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.7e-117 426.4 290 68.6
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.7e-117 426.4 282 68.4
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 8.6e-117 424.1 274 70.4
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.1e-116 423.7 282 69.5
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.5e-116 423.3 285 68.4
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.9e-116 422.9 281 67.3
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 7.3e-116 421.0 287 66.2
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 9.5e-116 420.6 269 70.6
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 9.5e-116 420.6 269 70.6
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.8e-115 419.1 281 66.5
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 3.6e-115 418.7 269 70.3
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.8e-114 416.4 287 66.2
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.2e-113 413.7 287 65.9
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 2.0e-113 412.9 273 67.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.6e-113 412.5 325 61.8
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.4e-111 406.8 281 66.9
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.4e-111 406.0 269 66.9
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.2e-110 403.7 268 69.4
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.3e-109 400.2 285 62.5
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 3.9e-109 398.7 246 75.6
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.1e-106 390.6 279 62.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.5e-105 386.7 262 67.2
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.6e-102 376.7 261 65.5
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.7e-102 375.9 246 69.5
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 6.6e-101 371.3 276 63.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 2.5e-100 369.4 254 68.5
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.4e-95 351.7 213 77.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.8e-83 312.8 263 54.8
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 8.2e-75 284.6 174 74.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.0e-73 280.0 260 49.2
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.8e-69 266.9 273 48.0
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.8e-69 266.9 261 48.3
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.5e-68 263.1 253 50.2
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.8e-53 213.8 157 66.2
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 8.0e-46 188.3 253 38.7
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 5.2e-45 185.7 94 93.6
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.0e-44 183.7 111 78.4
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 4.5e-41 172.6 133 64.7
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.2e-40 170.2 194 45.9
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.5e-39 167.5 105 69.5
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 9.7e-36 154.8 311 37.0
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-34 151.0 95 71.6
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.3e-27 127.9 88 65.9
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.3e-27 125.2 77 74.0
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 2.1e-22 110.5 66 75.8
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 8.0e-22 108.6 67 74.6
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 1.7e-08 64.3 41 65.9
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.8e-06 57.0 48 58.3


User provided reference genes

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