Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G061366 Glycine max HOM05D000687 ORTHO05D000515 6.6e-42 173.7 93 100.0
Glyma.07G188000 Glycine max HOM05D000687 ORTHO05D000515 9.2e-20 100.1 76 76.3
Phvul.002G219500 Phaseolus vulgaris HOM05D000687 ORTHO05D000515 2.7e-11 72.0 76 57.9
Lj4g0011257 Lotus japonicus HOM05D000687 ORTHO05D000515 8.7e-10 67.0 79 45.6
VMungo0251G1140 Vigna mungo HOM05D000687 ORTHO05D000515 1.5e-09 66.2 79 48.1
TPR.G13931 Trifolium pratense HOM05D000687 ORTHO05D000515 4.3e-09 64.7 74 51.4
FvH4_3g03180 Fragaria vesca HOM05D000687 ORTHO05D000515 2.8e-08 62.0 77 46.8
Lj6g0006209 Lotus japonicus HOM05D000687 ORTHO05D000515 3.6e-08 61.6 39 69.2
MD05G1334600 Malus domestica HOM05D000687 ORTHO05D000515 3.6e-08 61.6 40 70.0
Medtr4g091930 Medicago truncatula HOM05D000687 ORTHO05D000515 3.6e-08 61.6 74 51.4
VMungo0540G1489 Vigna mungo HOM05D000687 ORTHO05D000515 3.6e-08 61.6 49 61.2
Glyma.13G250100 Glycine max HOM05D000687 ORTHO05D000515 4.8e-08 61.2 74 48.6
Glyma.15G064100 Glycine max HOM05D000687 ORTHO05D000515 4.8e-08 61.2 39 71.8
CANSAT56G3308 Cannabis sativa HOM05D000687 ORTHO05D000515 6.2e-08 60.8 75 48.0
Lalb_Chr15g0090191 Lupinus albus HOM05D000687 ORTHO05D000515 6.2e-08 60.8 74 59.5
arahy.Tifrunner.gnm1.ann1.0CMJ96 Arachis hypogaea HOM05D000687 ORTHO05D000515 8.1e-08 60.5 74 48.6
arahy.Tifrunner.gnm1.ann1.PL0MZ0 Arachis hypogaea HOM05D000687 ORTHO05D000761 8.1e-08 60.5 74 48.6
Lalb_Chr05g0218031 Lupinus albus HOM05D000687 ORTHO05D000515 1.1e-07 60.1 74 50.0
Medtr4g064460 Medicago truncatula HOM05D000687 ORTHO05D000515 1.1e-07 60.1 74 50.0
Medtr4g091980 Medicago truncatula HOM05D000687 ORTHO05D000515 1.4e-07 59.7 73 45.2
FAN25G2939 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.8e-07 59.3 40 65.0
Phvul.006G195300 Phaseolus vulgaris HOM05D000687 ORTHO05D000515 1.8e-07 59.3 36 69.4
TPR.G13905 Trifolium pratense HOM05D000687 ORTHO05D000515 2.4e-07 58.9 74 45.9
FAN21G0101 Fragaria x ananassa HOM05D000687 ORTHO05D000515 3.1e-07 58.5 77 45.5
Lalb_Chr09g0327211 Lupinus albus HOM05D000687 ORTHO05D000515 4.0e-07 58.2 37 67.6
Psat7g107480 Pisum sativum HOM05D000687 ORTHO05D000515 4.0e-07 58.2 72 48.6
Psat7g107560 Pisum sativum HOM05D000687 ORTHO05D000515 4.0e-07 58.2 74 47.3
Psat1g210720 Pisum sativum HOM05D000687 ORTHO05D000515 5.3e-07 57.8 38 68.4
FAN25G3332 Fragaria x ananassa HOM05D000687 ORTHO05D000515 9.0e-07 57.0 37 67.6
Prupe.4G030700 Prunus persica HOM05D000687 ORTHO05D000515 9.0e-07 57.0 74 45.9
RcHm_v2.0_Chr5g0004811 Rosa chinensis HOM05D000687 ORTHO05D000515 9.0e-07 57.0 77 44.2
CiPaw.09G153800 Carya illinoinensis HOM05D000687 ORTHO05D000515 2.0e-06 55.8 36 63.9
Cfa000293 Carpinus fangiana HOM05D000687 ORTHO05D000515 2.6e-06 55.5 37 62.2
Haze_06640 Corylus avellana HOM05D000687 ORTHO05D000515 2.6e-06 55.5 37 62.2
Haze_06651 Corylus avellana HOM05D000687 ORTHO05D000515 2.6e-06 55.5 37 62.2
MD10G1309500 Malus domestica HOM05D000687 ORTHO05D000515 2.6e-06 55.5 37 67.6
PSO541G3582 Papaver somniferum HOM05D000687 ORTHO05D000515 2.6e-06 55.5 39 59.0
PSO675G1189 Papaver somniferum HOM05D000687 ORTHO05D000515 2.6e-06 55.5 39 59.0
Ca_18463_v3 Cicer arietinum L. HOM05D000687 ORTHO05D000515 3.4e-06 55.1 36 66.7
Ca_29635_v3 Cicer arietinum L. HOM05D000687 ORTHO05D000515 3.4e-06 55.1 36 66.7
Actinidia35302 Actinidia chinensis HOM05D000687 ORTHO05D000515 5.8e-06 54.3 39 59.0
CSS0018057 Camellia sinensis var. sinensis HOM05D000687 ORTHO05D000515 5.8e-06 54.3 39 56.4
Manes.16G015700 Manihot esculenta HOM05D000687 ORTHO05D000515 5.8e-06 54.3 37 59.5
QL05p077819 Quercus lobata HOM05D000687 ORTHO05D000515 5.8e-06 54.3 37 62.2
TWI38G1448 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 5.8e-06 54.3 36 63.9
Atru.chr10.2076 Acer truncatum HOM05D000687 ORTHO05D000515 9.9e-06 53.5 40 60.0
Atru.chr10.2086 Acer truncatum HOM05D000687 ORTHO05D000515 9.9e-06 53.5 40 60.0
Atru.chr10.2089 Acer truncatum HOM05D000687 ORTHO05D000515 9.9e-06 53.5 40 60.0
arahy.Tifrunner.gnm1.ann1.0UU0DW Arachis hypogaea HOM05D000687 ORTHO05D000515 9.9e-06 53.5 41 61.0
arahy.Tifrunner.gnm1.ann1.B5SVB5 Arachis hypogaea HOM05D000687 ORTHO05D000515 9.9e-06 53.5 41 61.0
arahy.Tifrunner.gnm1.ann1.D5NJTB Arachis hypogaea HOM05D000687 ORTHO05D000515 9.9e-06 53.5 41 61.0
arahy.Tifrunner.gnm1.ann1.FWIZ6L Arachis hypogaea HOM05D000687 ORTHO05D000515 9.9e-06 53.5 41 61.0
SHI02134 Sapria himalayana HOM05D000687 ORTHO05D000515 9.9e-06 53.5 37 62.2


User provided reference genes

Program Settings