Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 2.6e-77 292.0 144 100.0
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 4.7e-55 218.0 116 93.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.0e-54 216.9 116 93.1
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.4e-51 206.5 123 82.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 4.1e-51 204.9 116 86.2
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 4.1e-51 204.9 116 86.2
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 4.0e-46 188.3 116 78.4
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.9e-44 182.2 116 77.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 4.9e-44 181.4 116 76.7
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.4e-43 179.9 116 75.0
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 3.2e-43 178.7 116 75.0
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.2e-43 178.7 116 75.9
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.0e-43 177.6 116 75.0
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.2e-43 177.2 116 75.0
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.2e-43 177.2 116 75.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.2e-43 177.2 116 75.0
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.2e-42 176.8 116 75.0
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.7e-42 175.6 116 73.3
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 4.6e-42 174.9 116 71.6
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 6.0e-42 174.5 116 75.0
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 7.8e-42 174.1 116 73.3
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 7.8e-42 174.1 116 73.3
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 7.8e-42 174.1 116 76.7
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.0e-41 173.7 116 73.3
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.7e-41 172.9 116 73.3
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.0e-41 172.2 116 70.7
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.9e-41 171.8 116 74.1
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 5.0e-41 171.4 116 70.7
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.1e-40 170.2 116 71.6
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.1e-40 170.2 116 71.6
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.5e-40 169.9 152 59.2
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.5e-40 169.9 116 75.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.5e-40 169.9 116 75.0
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.9e-40 169.5 116 72.4
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.9e-40 169.5 116 72.4
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.9e-40 169.5 116 69.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.3e-40 168.7 116 68.1
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 4.3e-40 168.3 116 70.7
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.3e-40 168.3 116 71.6
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 4.3e-40 168.3 124 67.7
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 5.6e-40 167.9 116 71.6
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 7.3e-40 167.5 116 71.6
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 7.3e-40 167.5 116 71.6
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 9.5e-40 167.2 116 69.8
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 9.5e-40 167.2 116 69.0
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-39 166.8 116 69.0
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-39 166.8 116 69.0
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.6e-39 166.4 116 71.6
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.6e-39 166.4 116 67.2
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.6e-39 166.4 116 70.7
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.1e-39 166.0 129 65.1
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 2.1e-39 166.0 124 66.1
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 3.6e-39 165.2 116 70.7
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 8.1e-39 164.1 116 69.8
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.4e-38 163.3 116 67.2
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 6.8e-38 161.0 116 69.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.0e-37 159.5 116 64.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 5.8e-37 157.9 116 67.2
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 7.5e-37 157.5 116 65.5
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 7.5e-37 157.5 116 64.7
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 7.5e-37 157.5 116 69.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.3e-36 156.8 116 64.7
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.3e-36 156.8 116 65.5
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 2.2e-36 156.0 116 64.7
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-36 155.6 116 69.0
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 3.7e-36 155.2 116 63.8
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.7e-36 155.2 116 63.8
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 6.4e-36 154.5 116 62.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 6.4e-36 154.5 116 62.9
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 6.4e-36 154.5 116 63.8
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 8.3e-36 154.1 116 62.9
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 8.3e-36 154.1 116 62.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 8.3e-36 154.1 116 62.9
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.1e-35 153.7 116 63.8
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.4e-35 153.3 116 63.8
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.1e-35 151.0 116 61.2
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 3.0e-33 145.6 72 97.2
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 8.1e-31 137.5 118 60.2
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.4e-29 132.1 116 56.9
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.8e-28 128.6 116 56.0
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.6e-24 114.0 116 50.0
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.6e-24 114.0 116 50.0
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 3.1e-22 109.0 73 65.8
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.7e-20 103.2 73 61.6
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 2.2e-20 102.8 95 60.0
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-20 102.4 72 66.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.9e-20 102.4 116 42.2
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.4e-19 100.1 73 61.6
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 4.6e-18 95.1 111 45.9
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 6.0e-18 94.7 104 45.2
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.3e-17 93.6 73 58.9
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.0e-17 92.4 107 40.2
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 3.9e-17 92.0 76 60.5
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.8e-15 85.9 137 38.7
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.8e-14 83.2 74 51.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 4.6e-10 68.6 37 86.5
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 5.1e-09 65.1 44 72.7
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 3.3e-08 62.4 101 34.7
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 4.3e-08 62.0 36 69.4
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.3e-08 62.0 46 67.4
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 7.4e-08 61.2 44 68.2
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 9.6e-08 60.8 44 70.5
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 4.0e-06 55.5 104 36.5
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.0e-06 55.5 36 63.9
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 6.9e-06 54.7 36 61.1


User provided reference genes

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