Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G006333 Glycine max HOM05D005461 ORTHO05D007157 2.2e-108 395.6 189 100.0
Phvul.002G280000 Phaseolus vulgaris HOM05D005461 ORTHO05D007157 3.1e-91 338.6 190 85.8
TPR.G12739 Trifolium pratense HOM05D005461 ORTHO05D007157 2.5e-88 328.9 186 85.5
Glyma.05G199000 Glycine max HOM05D005461 ORTHO05D007157 2.7e-87 325.5 173 91.3
Psat7g040200 Pisum sativum HOM05D005461 ORTHO05D007157 4.7e-87 324.7 187 83.4
Lj4g0008483 Lotus japonicus HOM05D005461 ORTHO05D007157 8.0e-87 323.9 186 82.3
Medtr8g095600 Medicago truncatula HOM05D005461 ORTHO05D007157 6.8e-86 320.9 187 84.0
Lalb_Chr07g0183921 Lupinus albus HOM05D005461 ORTHO05D007157 1.2e-85 320.1 185 82.2
Ca_16815_v3 Cicer arietinum L. HOM05D005461 ORTHO05D007157 1.5e-85 319.7 186 82.3
arahy.Tifrunner.gnm1.ann1.UDW2VH Arachis hypogaea HOM05D005461 ORTHO05D007157 9.8e-85 317.0 186 81.2
arahy.Tifrunner.gnm1.ann1.YX3IJQ Arachis hypogaea HOM05D005461 ORTHO05D007157 1.1e-83 313.5 186 80.6
Ciclev10030921m.g Citrus clementina HOM05D005461 ORTHO05D007157 4.1e-83 311.6 187 79.1
TAR633G0377 Trochodendron aralioides HOM05D005461 ORTHO05D007157 5.4e-83 311.2 183 80.9
vmacro19100 Vaccinium macrocarpon HOM05D005461 ORTHO05D007157 9.1e-83 310.5 185 80.0
TWI23G0268 Tripterygium wilfordii HOM05D005461 ORTHO05D007157 2.7e-82 308.9 187 79.7
Aqoxy5G02973 Aquilegia oxysepala HOM05D005461 ORTHO05D007157 1.3e-81 306.6 183 78.7
Gohir.D12G197200 Gossypium hirsutum HOM05D005461 ORTHO05D007157 2.3e-81 305.8 185 77.3
Manes.14G043000 Manihot esculenta HOM05D005461 ORTHO05D007157 2.9e-81 305.4 185 78.4
Gorai.008G211800 Gossypium raimondii HOM05D005461 ORTHO05D007157 1.9e-80 302.8 185 76.8
Gorai.012G153500 Gossypium raimondii HOM05D005461 ORTHO05D007157 1.9e-80 302.8 185 77.3
QL10p000170 Quercus lobata HOM05D005461 ORTHO05D007157 1.9e-80 302.8 185 76.8
COL.COLO4_37281 Corchorus olitorius HOM05D005461 ORTHO05D007157 4.2e-80 301.6 187 77.0
Gohir.A12G194800 Gossypium hirsutum HOM05D005461 ORTHO05D007157 4.2e-80 301.6 185 76.8
Dinv23243 Davidia involucrata HOM05D002313 ORTHO05D003747 5.5e-80 301.2 185 77.8
Manes.14G043100 Manihot esculenta HOM05D005461 ORTHO05D007157 9.5e-80 300.4 185 77.8
Sed0004824 Sechium edule HOM05D005461 ORTHO05D007157 1.2e-79 300.1 187 75.9
CSS0042507 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 1.6e-79 299.7 186 75.8
CSS0050110 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 1.6e-79 299.7 186 75.3
Gohir.D04G165100 Gossypium hirsutum HOM05D005461 ORTHO05D007157 1.6e-79 299.7 185 76.8
Thecc.03G143100 Theobroma cacao HOM05D005461 ORTHO05D007157 1.6e-79 299.7 183 76.5
FvH4_5g09971 Fragaria vesca HOM05D005461 ORTHO05D007157 2.1e-79 299.3 179 78.8
CSS0038399 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 2.8e-79 298.9 186 75.8
GSVIVG01019284001 Vitis vinifera HOM05D005461 ORTHO05D007157 3.6e-79 298.5 177 79.1
CiPaw.11G031400 Carya illinoinensis HOM05D005461 ORTHO05D007157 6.1e-79 297.7 185 75.1
CsaV3_3G003620 Cucumis sativus L. HOM05D005461 ORTHO05D007157 6.1e-79 297.7 188 74.5
MELO3C014033.2 Cucumis melo HOM05D005461 ORTHO05D007157 8.0e-79 297.4 188 75.0
Rhsim08G0199900 Rhododendron simsii HOM05D005461 ORTHO05D007157 8.0e-79 297.4 185 76.8
Actinidia18282 Actinidia chinensis HOM05D005461 ORTHO05D007157 1.8e-78 296.2 185 76.2
Migut.I00655 Erythranthe guttata HOM05D005461 ORTHO05D007157 1.8e-78 296.2 185 75.1
Lj9A488T69 Lonicera japonica HOM05D005461 ORTHO05D007157 1.8e-78 296.2 185 75.7
ClCG00G000370 Citrullus lanatus HOM05D005461 ORTHO05D007157 6.8e-78 294.3 188 75.0
Oeu012857.1 Olea europaea HOM05D005461 ORTHO05D007157 6.8e-78 294.3 185 74.6
DCAR_016327 Daucus carota HOM05D005461 ORTHO05D007157 2.0e-77 292.7 185 74.6
Nn3g16200 Nelumbo nucifera HOM05D005461 ORTHO05D007157 2.0e-77 292.7 175 78.9
SalBow7G2149 Salvia bowleyana HOM05D005461 ORTHO05D007157 2.0e-77 292.7 185 75.7
FAN18G0482 Fragaria x ananassa HOM05D005461 ORTHO05D007157 2.6e-77 292.4 170 81.2
Cfa018691 Carpinus fangiana HOM05D005461 ORTHO05D007157 3.4e-77 292.0 170 81.2
Hma1.2p1_1333F.1_g276230 Hydrangea macrophylla HOM05D005461 ORTHO05D007157 3.4e-77 292.0 182 76.4
Cc04_g05620 Coffea canephora HOM05D005461 ORTHO05D007157 4.4e-77 291.6 185 75.1
GSVIVG01019282001 Vitis vinifera HOM05D005461 ORTHO05D007157 4.4e-77 291.6 177 77.4
Atru.chr6.1950 Acer truncatum HOM05D005461 ORTHO05D007157 9.8e-77 290.4 167 82.6
RcHm_v2.0_Chr7g0188291 Rosa chinensis HOM05D005461 ORTHO05D007157 9.8e-77 290.4 175 78.9
Cpa.g.sc13.197 Carica papaya HOM05D005461 ORTHO05D007157 1.7e-76 289.7 179 76.5
ECA246G4936 Erigeron canadensis HOM05D005461 ORTHO05D007157 2.2e-76 289.3 185 72.4
Eucgr.K02184 Eucalyptus grandis HOM05D005461 ORTHO05D007157 2.8e-76 288.9 181 75.7
MSTRG.22823 Avicennia marina HOM05D005461 ORTHO05D007157 3.7e-76 288.5 185 74.1
HanXRQChr06g0183731 Helianthus annuus HOM05D005461 ORTHO05D007157 3.7e-76 288.5 185 71.9
PSO478G5039 Papaver somniferum HOM05D005461 ORTHO05D007157 4.9e-76 288.1 183 72.7
Hma1.2p1_1242F.1_g269870 Hydrangea macrophylla HOM05D005461 ORTHO05D007157 6.3e-76 287.7 181 75.7
PSO017G0101 Papaver somniferum HOM05D005461 ORTHO05D007157 6.3e-76 287.7 183 72.7
Thhalv10012903m.g Eutrema salsugineum HOM05D005461 ORTHO05D007157 1.4e-75 286.6 185 73.5
BcaC06g32445 Brassica carinata HOM05D005461 ORTHO05D007157 1.8e-75 286.2 186 72.0
C09p69500 Brassica napus HOM05D005461 ORTHO05D007157 1.8e-75 286.2 186 72.0
FAN08G1284 Fragaria x ananassa HOM05D005461 ORTHO05D007157 1.8e-75 286.2 170 80.0
Lsat_1_v5_gn_5_9480 Lactuca sativa HOM05D005461 ORTHO05D007157 1.8e-75 286.2 185 71.9
Prupe.5G138700 Prunus persica HOM05D005461 ORTHO05D007157 1.8e-75 286.2 180 76.1
Ah.11g047030 Amaranthus hybridus HOM05D005461 ORTHO05D007157 5.4e-75 284.6 185 73.5
Sp6g35510 Schrenkiella parvula HOM05D005461 ORTHO05D007157 5.4e-75 284.6 187 72.2
BolC9t59694H Brassica oleracea HOM05D005461 ORTHO05D007157 7.0e-75 284.3 186 71.5
Nitab4.5_0002679g0030 Nicotiana tabacum HOM05D005461 ORTHO05D007157 7.0e-75 284.3 185 72.4
Potri.015G109400 Populus trichocarpa HOM05D005461 ORTHO05D007157 7.0e-75 284.3 177 76.8
AT5G07360 Arabidopsis thaliana HOM05D005461 ORTHO05D007157 1.2e-74 283.5 185 71.4
EL10Ac5g11262 Beta vulgaris HOM05D005461 ORTHO05D007157 1.2e-74 283.5 185 73.0
Carub.0006s0633 Capsella rubella HOM05D005461 ORTHO05D007157 1.2e-74 283.5 187 70.6
FAN04G1626 Fragaria x ananassa HOM05D005461 ORTHO05D007157 1.2e-74 283.5 170 78.8
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 1.2e-74 283.5 185 72.4
Peaxi162Scf00314g00734 Petunia axillaris HOM05D005461 ORTHO05D007157 2.7e-74 282.3 187 71.1
PGR102G2106 Punica granatum HOM05D005461 ORTHO05D007157 2.7e-74 282.3 189 71.4
Sopen06g025970 Solanum pennellii HOM05D005461 ORTHO05D007157 2.7e-74 282.3 185 71.4
BcaC06g32446 Brassica carinata HOM05D005461 ORTHO05D007157 4.5e-74 281.6 185 71.4
HPP92_006437 Vanilla planifolia HOM05D005461 ORTHO05D007157 4.5e-74 281.6 173 75.7
AL6G17660 Arabidopsis lyrata HOM05D005461 ORTHO05D007157 5.9e-74 281.2 185 70.8
Nitab4.5_0005215g0030 Nicotiana tabacum HOM05D005461 ORTHO05D007157 5.9e-74 281.2 185 72.4
SGA_v2.0_scaffold5G02813 Striga asiatica HOM05D005461 ORTHO05D007157 5.9e-74 281.2 185 71.4
GSVIVG01019287001 Vitis vinifera HOM05D005461 ORTHO05D007157 7.8e-74 280.8 168 79.2
A10p29110 Brassica napus HOM05D005461 ORTHO05D007157 1.7e-73 279.6 185 71.4
BraA10t44960Z Brassica rapa HOM05D005461 ORTHO05D007157 1.7e-73 279.6 185 71.4
Nitab4.5_0011048g0010 Nicotiana tabacum HOM05D005461 ORTHO05D007157 2.3e-73 279.3 174 76.4
Hund02519 Selenicereus undatus HOM05D005461 ORTHO05D007157 2.3e-73 279.3 183 72.7
Solyc06g068690.4 Solanum lycopersicum HOM05D005461 ORTHO05D007157 2.3e-73 279.3 185 70.8
Sabra15G0131600 Salix brachista HOM05D005461 ORTHO05D007157 6.6e-73 277.7 170 78.2
Solyc03g118030.3 Solanum lycopersicum HOM05D005461 ORTHO05D007157 1.5e-72 276.6 174 75.9
Sopen03g036930 Solanum pennellii HOM05D005461 ORTHO05D007157 1.5e-72 276.6 174 75.9
PGSC0003DMG400014230 Solanum tuberosum HOM05D005461 ORTHO05D007157 1.5e-72 276.6 174 76.4
MD00G1076700 Malus domestica HOM05D005461 ORTHO05D007157 1.9e-72 276.2 171 77.2
CAN.G1008.41 Capsicum annuum HOM05D005461 ORTHO05D007157 3.3e-72 275.4 174 76.4
AUR62036969 Chenopodium quinoa HOM05D005461 ORTHO05D007157 3.3e-72 275.4 185 70.8
MBI07_g42016_MAGBIO Magnolia biondii HOM05D005461 ORTHO05D007157 4.3e-72 275.0 165 77.0
Os11g0536800 Oryza sativa ssp. japonica HOM05D005461 ORTHO05D007157 2.1e-71 272.7 170 77.1
AUR62032200 Chenopodium quinoa HOM05D005461 ORTHO05D007157 2.8e-71 272.3 185 69.2
Nitab4.5_0000976g0230 Nicotiana tabacum HOM05D005461 ORTHO05D007157 8.0e-71 270.8 174 74.7
Aa31LG3G19010 Aethionema arabicum HOM05D005461 ORTHO05D007157 1.4e-70 270.0 189 66.7
Hund02520 Selenicereus undatus HOM05D005461 ORTHO05D007157 4.0e-70 268.5 185 67.6
CAN.G1089.9 Capsicum annuum HOM05D005461 ORTHO05D007157 2.0e-69 266.2 175 70.3
unitig_8.g3049 Utricularia gibba HOM05D005461 ORTHO05D007157 2.0e-69 266.2 184 70.1
ATR0582G258 Amborella trichopoda HOM05D005461 ORTHO05D007157 2.6e-69 265.8 165 75.2
CARHR205790 Cardamine hirsuta HOM05D005461 ORTHO05D007157 3.4e-69 265.4 183 68.9
CAN.G1008.42 Capsicum annuum HOM05D005461 ORTHO05D007157 7.5e-69 264.2 174 72.4
FvH4_5g09970 Fragaria vesca HOM05D005461 ORTHO05D007157 9.8e-69 263.8 170 74.1
Zm00001eb197940 Zea mays HOM05D005461 ORTHO05D007157 2.9e-68 262.3 170 74.1
Aa31LG1G5760 Aethionema arabicum HOM05D005461 ORTHO05D007157 3.7e-68 261.9 174 69.0
VMungo0251G2939 Vigna mungo HOM05D005461 ORTHO05D007157 7.0e-67 257.7 142 86.6
DCAR_016328 Daucus carota HOM05D002313 ORTHO05D007157 1.9e-64 249.6 166 70.5
ClCG10G003620 Citrullus lanatus HOM05D005461 ORTHO05D007157 2.6e-61 239.2 188 63.8
SMO367G0238 Selaginella moellendorffii HOM05D005461 ORTHO05D007157 4.1e-59 231.9 169 66.3
MD14G1144500 Malus domestica HOM05D005461 ORTHO05D007157 3.6e-55 218.8 198 57.1
Pp3c27_8370 Physcomitrium patens HOM05D005461 ORTHO05D007157 1.4e-54 216.9 173 64.2
Haze_05604 Corylus avellana HOM05D005461 ORTHO05D007157 3.1e-54 215.7 125 79.2
Pp3c4_17250 Physcomitrium patens HOM05D005461 ORTHO05D007157 5.8e-53 211.5 173 62.4
Haze_07079 Corylus avellana HOM05D005461 ORTHO05D007157 4.0e-46 188.7 135 65.9
AagrBONN_evm.TU.Sc2ySwM_228.2736 Anthoceros agrestis HOM05D005461 ORTHO05D007157 3.9e-41 172.2 173 51.4
RcHm_v2.0_Chr7g0188311 Rosa chinensis HOM05D005461 ORTHO05D007157 2.9e-36 156.0 142 59.9
Peaxi162Scf00550g00551 Petunia axillaris HOM05D000208 ORTHO05D000130 3.8e-28 129.0 146 49.3
MD00G1076500 Malus domestica HOM05D005461 ORTHO05D007157 1.4e-27 127.1 154 46.8
Sc04g0000020 Simmondsia chinensis HOM05D005461 ORTHO05D007157 1.3e-25 120.6 64 84.4
Sc04g0000060 Simmondsia chinensis HOM05D005461 ORTHO05D007157 1.3e-25 120.6 64 84.4
CSS0041831 Camellia sinensis var. sinensis HOM05D005461 ORTHO05D007157 1.9e-24 116.7 64 79.7
Pp3c17_7850 Physcomitrium patens HOM05D005461 ORTHO05D007157 6.4e-20 101.7 78 59.0
HanXRQChr09g0252721 Helianthus annuus HOM05D005461 ORTHO05D007157 7.4e-16 88.2 48 81.2


User provided reference genes

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