Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G001100 Glycine max HOM05D000043 ORTHO05D026247 8.2e-103 377.1 194 100.0
Glyma.05G193000 Glycine max HOM05D000043 ORTHO05D002208 2.2e-76 289.3 176 88.1
Phvul.002G273600 Phaseolus vulgaris HOM05D000043 ORTHO05D002208 3.5e-53 212.2 176 68.2
VMungo0251G3342 Vigna mungo HOM05D000043 ORTHO05D002208 4.3e-35 152.1 120 68.3
Lalb_Chr12g0203111 Lupinus albus HOM05D000043 ORTHO05D002208 3.1e-33 146.0 120 62.5
Lalb_Chr07g0184351 Lupinus albus HOM05D000043 ORTHO05D002208 3.2e-30 136.0 120 60.0
Lj4g0027013 Lotus japonicus HOM05D000043 ORTHO05D002208 5.4e-30 135.2 120 60.8
Medtr8g093870 Medicago truncatula HOM05D000043 ORTHO05D002208 5.4e-30 135.2 114 62.3
Psat7g045000 Pisum sativum HOM05D000043 ORTHO05D002208 8.1e-26 121.3 121 54.5
TPR.G22492 Trifolium pratense HOM05D000043 ORTHO05D015010 1.1e-25 120.9 114 57.0
TPR.G34559 Trifolium pratense HOM05D000043 ORTHO05D002208 1.1e-25 120.9 138 53.6
arahy.Tifrunner.gnm1.ann1.G5DPCC Arachis hypogaea HOM05D000043 ORTHO05D002208 1.4e-25 120.6 135 52.6
arahy.Tifrunner.gnm1.ann1.2547FM Arachis hypogaea HOM05D000043 ORTHO05D002208 1.4e-22 110.5 135 51.1
Ca_16957_v3 Cicer arietinum L. HOM05D000043 ORTHO05D002208 1.9e-19 100.1 120 51.7
QL10p042542 Quercus lobata HOM05D000043 ORTHO05D002208 8.7e-12 74.7 122 41.8
Haze_25280 Corylus avellana HOM05D000043 ORTHO05D002208 5.6e-11 72.0 124 41.9
Cfa002923 Carpinus fangiana HOM05D000043 ORTHO05D002208 8.1e-10 68.2 123 39.8
CiPaw.04G081000 Carya illinoinensis HOM05D000043 ORTHO05D002208 1.4e-09 67.4 107 42.1
Manes.12G157400 Manihot esculenta HOM05D000043 ORTHO05D002208 5.3e-09 65.5 124 37.9
TWI79G1187 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 2.2e-07 60.1 105 40.0
QL10p042656 Quercus lobata HOM05D000043 ORTHO05D026247 2.9e-07 59.7 52 55.8
Thecc.01G135400 Theobroma cacao HOM05D000043 ORTHO05D002208 4.9e-07 58.9 104 38.5
Sabra07G0085300 Salix brachista HOM05D000043 ORTHO05D002208 6.4e-07 58.5 85 45.9
Nn5g28486 Nelumbo nucifera HOM05D000043 ORTHO05D002208 8.4e-07 58.2 66 43.9
TWI31G1078 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 1.1e-06 57.8 120 35.0
ClCG01G015190 Citrullus lanatus HOM05D000043 ORTHO05D002208 3.2e-06 56.2 107 35.5
Eucgr.I00187 Eucalyptus grandis HOM05D000043 ORTHO05D002208 3.2e-06 56.2 119 37.0
Duzib264G0569 Durio zibethinus HOM05D000043 ORTHO05D002208 4.2e-06 55.8 87 42.5
Potri.005G065100 Populus trichocarpa HOM05D000043 ORTHO05D002208 5.4e-06 55.5 185 31.9
Sabra05G0053900 Salix brachista HOM05D000043 ORTHO05D002208 5.4e-06 55.5 48 50.0


User provided reference genes

Program Settings