Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 9.1e-113 410.2 204 100.0
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 6.2e-69 264.6 245 64.5
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 4.3e-62 241.9 245 60.4
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 5.6e-54 214.9 241 55.2
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 6.2e-53 211.5 243 53.5
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 4.0e-52 208.8 243 54.3
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.2e-51 207.2 226 56.6
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 5.8e-51 204.9 243 52.3
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 2.1e-48 196.4 245 50.2
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 8.7e-39 164.5 254 42.1
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 6.9e-36 154.8 136 61.8
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 3.2e-33 146.0 255 39.2
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 5.5e-33 145.2 256 40.2
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.2e-32 144.1 245 39.6
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.6e-32 143.7 252 39.7
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 2.3e-31 139.8 255 38.0
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 5.1e-31 138.7 252 38.5
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 5.1e-31 138.7 294 35.7
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 8.8e-31 137.9 252 38.5
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 1.1e-30 137.5 226 42.9
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 5.7e-30 135.2 226 42.5
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 5.7e-30 135.2 239 40.6
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 5.7e-30 135.2 239 40.2
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 7.4e-30 134.8 198 46.5
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 9.7e-30 134.4 254 37.0
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 1.3e-29 134.0 243 39.5
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 1.7e-29 133.7 238 38.7
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.7e-29 133.7 251 37.5
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 4.8e-29 132.1 242 41.3
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 8.2e-29 131.3 246 39.8
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 1.1e-28 131.0 239 40.2
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 1.4e-28 130.6 246 39.8
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 1.8e-28 130.2 245 39.2
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 3.1e-28 129.4 237 38.8
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 4.1e-28 129.0 234 41.0
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 9.1e-28 127.9 253 35.2
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.0e-26 124.4 231 39.4
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 2.2e-26 123.2 256 37.1
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 2.9e-26 122.9 233 38.6
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 2.9e-26 122.9 233 38.2
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 2.9e-26 122.9 233 38.2
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 2.9e-26 122.9 233 38.2
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 2.9e-26 122.9 255 36.1
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 5.0e-26 122.1 252 39.7
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.1e-25 120.9 233 38.2
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.1e-25 120.9 252 39.7
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.1e-25 120.9 253 35.2
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 1.1e-25 120.9 238 36.1
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 5.5e-25 118.6 260 34.6
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 7.2e-25 118.2 249 35.3
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 1.6e-24 117.1 260 35.8
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 2.1e-24 116.7 254 35.4
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 2.1e-24 116.7 258 32.6
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 3.6e-24 115.9 258 34.1
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 3.6e-24 115.9 256 34.4
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 4.7e-24 115.5 235 38.3
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 6.1e-24 115.2 131 47.3
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 7.9e-24 114.8 235 38.3
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 7.9e-24 114.8 142 48.6
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.0e-23 114.4 244 35.2
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 1.0e-23 114.4 256 33.6
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.4e-23 114.0 260 35.0
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 6.7e-23 111.7 244 38.1
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 4.4e-22 109.0 248 34.3
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 7.4e-22 108.2 132 50.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 3.7e-21 105.9 259 35.1
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 4.8e-21 105.5 252 32.1
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 8.2e-21 104.8 272 32.7
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.8e-20 103.6 134 48.5
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 1.8e-20 103.6 268 32.8
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 1.8e-20 103.6 231 35.9
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 3.1e-20 102.8 211 35.1
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 4.1e-20 102.4 265 32.8
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.3e-20 102.1 265 31.3
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.3e-20 102.1 265 31.3
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 9.1e-20 101.3 251 33.1
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 4.5e-19 99.0 303 30.0
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 7.7e-19 98.2 135 43.0
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.7e-18 97.1 132 42.4
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 1.7e-18 97.1 108 50.0
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 6.5e-18 95.1 254 31.5
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 6.5e-18 95.1 140 45.0
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 4.2e-17 92.4 136 41.9
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 9.4e-17 91.3 211 35.5
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 4.4e-14 82.4 137 38.0
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 9.7e-14 81.3 88 54.5
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 2.2e-13 80.1 135 41.5
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 8.2e-13 78.2 184 33.7
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 4.1e-12 75.9 165 38.2
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 1.6e-11 73.9 269 28.3
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 2.7e-11 73.2 70 54.3
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 4.5e-11 72.4 153 37.3
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.0e-10 71.2 129 35.7
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 1.7e-10 70.5 88 46.6
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 2.9e-10 69.7 133 33.1
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 3.8e-10 69.3 104 39.4
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 2.5e-09 66.6 251 27.1
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 1.2e-08 64.3 137 35.8
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.2e-08 64.3 146 36.3
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.6e-08 63.9 128 33.6
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.7e-08 63.2 146 35.6
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 3.0e-07 59.7 98 37.8
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 4.0e-07 59.3 134 34.3
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 3.4e-06 56.2 133 30.1


User provided reference genes

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