Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 6.9e-139 497.3 248 100.0
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 1.8e-134 482.6 248 96.4
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 3.2e-128 461.8 238 95.4
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.8e-124 448.7 237 92.8
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.2e-120 435.3 238 88.7
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 7.2e-120 434.1 239 90.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 2.1e-119 432.6 237 88.6
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.6e-119 431.8 236 89.0
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 4.7e-119 431.4 242 87.6
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 6.1e-119 431.0 247 85.8
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.0e-118 428.7 237 87.8
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.0e-118 428.7 238 88.7
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 3.0e-118 428.7 238 88.7
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 8.8e-118 427.2 232 88.8
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 8.8e-118 427.2 237 86.9
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 8.8e-118 427.2 237 86.9
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.3e-117 425.2 237 86.5
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.3e-117 425.2 239 86.2
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 4.4e-117 424.9 239 87.0
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.8e-115 419.5 233 86.7
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 4.1e-115 418.3 239 85.8
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.2e-114 416.8 231 87.9
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.6e-114 416.4 246 85.8
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.6e-114 416.4 246 85.8
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.6e-114 416.4 247 83.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 2.0e-114 416.0 239 86.2
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 2.0e-114 416.0 244 83.6
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 2.0e-114 416.0 251 83.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 3.5e-114 415.2 238 84.0
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 3.5e-114 415.2 237 84.4
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.5e-114 414.8 239 84.9
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.9e-114 414.5 236 86.0
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 7.7e-114 414.1 239 84.9
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 1.7e-113 412.9 223 90.6
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 6.5e-113 411.0 232 86.2
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.5e-112 409.8 241 83.4
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 3.2e-112 408.7 234 87.2
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.2e-112 408.7 225 88.4
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.5e-112 407.9 242 84.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 7.2e-112 407.5 227 86.8
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 7.2e-112 407.5 232 87.1
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.6e-111 406.4 246 82.5
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.6e-111 405.2 212 93.9
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 1.4e-110 403.3 238 81.5
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.8e-110 402.9 238 81.5
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 4.0e-110 401.7 236 85.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 4.0e-110 401.7 238 81.1
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 3.3e-109 398.7 233 83.3
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 7.5e-109 397.5 242 81.8
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-107 393.3 237 80.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-107 393.3 237 80.2
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 9.1e-107 390.6 237 81.9
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.0e-106 389.4 224 83.5
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 3.5e-106 388.7 222 87.4
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 3.5e-106 388.7 243 77.4
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.0e-105 387.1 224 84.8
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.7e-105 386.3 251 76.5
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 3.8e-105 385.2 244 80.7
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.5e-105 384.0 240 82.5
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 8.5e-105 384.0 240 82.5
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.9e-104 382.9 240 80.8
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.2e-104 382.1 242 78.9
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.1e-103 379.4 226 83.6
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 3.6e-103 378.6 232 78.4
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.8e-99 366.3 234 79.1
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.1e-99 365.2 234 79.1
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.3e-96 355.5 248 73.4
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 3.6e-95 352.1 233 73.4
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.6e-95 352.1 232 72.0
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.8e-94 349.7 233 75.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 5.2e-94 348.2 232 70.3
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 2.8e-92 342.4 230 72.6
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 6.3e-92 341.3 235 72.8
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 8.3e-92 340.9 229 76.0
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.4e-91 339.3 235 70.6
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 2.7e-90 335.9 197 82.7
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.5e-90 335.5 249 71.5
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 3.5e-90 335.5 249 70.3
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 5.9e-90 334.7 234 69.2
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 7.8e-90 334.3 198 82.3
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.5e-88 329.3 234 73.5
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.1e-86 322.4 179 86.6
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 5.8e-85 318.2 199 79.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 5.4e-83 311.6 229 68.1
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 4.0e-78 295.4 259 62.9
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 2.2e-76 289.7 223 68.6
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.4e-70 270.4 231 59.3
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 5.4e-67 258.5 142 87.3
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-64 250.8 165 78.8
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 3.6e-63 245.7 218 55.0
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 6.2e-63 245.0 139 87.1
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.3e-60 237.3 150 76.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.2e-59 232.6 240 53.8
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.5e-56 223.0 218 51.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.4e-30 136.7 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.3e-25 120.9 220 34.5
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.0e-21 107.1 122 54.1
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 6.5e-12 75.5 57 66.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 2.6e-08 63.5 44 68.2


User provided reference genes

Program Settings