Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 6.3e-74 280.8 154 100.0
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.7e-26 123.2 81 79.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 8.7e-23 110.9 80 71.2
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 4.3e-22 108.6 78 70.5
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.3e-18 97.1 94 54.3
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.2e-18 96.3 70 65.7
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 3.9e-15 85.5 73 57.5
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 6.6e-15 84.7 74 55.4
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.9e-14 83.2 103 48.5
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.3e-14 82.4 84 57.1
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 3.3e-14 82.4 84 57.1
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 3.3e-14 82.4 100 48.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.3e-14 82.0 78 57.7
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 9.6e-14 80.9 84 54.8
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 9.6e-14 80.9 78 57.7
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-13 80.5 78 56.4
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-13 80.5 78 56.4
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.6e-13 80.1 78 55.1
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.6e-13 80.1 78 55.1
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.1e-13 79.7 84 56.0
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.8e-13 79.3 75 56.0
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 2.8e-13 79.3 78 55.1
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.8e-13 79.3 77 57.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 3.6e-13 79.0 78 56.4
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 6.2e-13 78.2 78 55.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.2e-13 78.2 78 52.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 8.1e-13 77.8 78 53.8
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 8.1e-13 77.8 78 52.6
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 8.1e-13 77.8 85 54.1
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 8.1e-13 77.8 78 53.8
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.8e-12 76.6 81 51.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 2.4e-12 76.3 78 52.6
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 4.0e-12 75.5 78 51.3
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 4.0e-12 75.5 78 52.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 5.3e-12 75.1 75 53.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 5.3e-12 75.1 75 53.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.5e-11 73.6 82 52.4
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.5e-11 73.6 82 52.4
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.5e-11 73.6 76 50.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.5e-11 72.0 82 50.0
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.5e-11 72.0 85 47.1
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.5e-11 72.0 85 47.1
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 5.8e-11 71.6 75 54.7
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 7.6e-11 71.2 75 53.3
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 7.6e-11 71.2 75 53.3
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 7.6e-11 71.2 75 53.3
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 7.6e-11 71.2 78 52.6
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 9.9e-11 70.9 73 45.2
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.3e-10 70.5 82 52.4
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 2.2e-10 69.7 75 48.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.9e-10 69.3 85 45.9
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 3.8e-10 68.9 75 52.0
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.8e-10 68.9 75 52.0
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 3.8e-10 68.9 85 45.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 4.9e-10 68.6 82 50.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 4.9e-10 68.6 76 47.4
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 6.4e-10 68.2 85 47.1
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 6.4e-10 68.2 85 47.1
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 6.4e-10 68.2 77 51.9
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 8.4e-10 67.8 76 44.7
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.1e-09 67.4 72 45.8
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.1e-09 67.4 85 43.5
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.1e-09 67.4 76 44.7
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.1e-09 67.4 85 44.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.9e-09 66.6 85 43.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 2.4e-09 66.2 72 51.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 3.2e-09 65.9 82 45.1
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 3.2e-09 65.9 79 50.6
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.2e-09 65.9 76 44.7
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 3.2e-09 65.9 78 50.0
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 4.2e-09 65.5 82 45.1
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 5.5e-09 65.1 78 47.4
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 7.1e-09 64.7 85 41.2
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 9.3e-09 64.3 76 44.7
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.6e-08 63.5 83 45.8
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.6e-08 63.5 76 46.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.7e-08 62.8 75 46.7
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 6.0e-08 61.6 82 42.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.0e-07 60.8 74 45.9
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.0e-07 60.8 72 47.2
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.0e-07 60.8 72 38.9
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 2.3e-07 59.7 72 48.6
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 3.0e-07 59.3 72 50.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 3.9e-07 58.9 76 40.8
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 8.7e-07 57.8 77 42.9
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.5e-06 57.0 75 45.3
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.9e-06 56.6 77 41.6
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 7.4e-06 54.7 79 43.0


User provided reference genes

Program Settings