Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.0e-180 635.6 312 100.0
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 3.0e-155 552.0 283 95.1
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 3.4e-151 538.5 279 95.0
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 2.3e-147 525.8 277 93.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 7.6e-127 457.6 284 83.8
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.3e-122 441.8 282 81.6
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 9.7e-122 440.7 282 81.2
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 2.6e-119 432.6 291 78.7
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 7.4e-114 414.5 279 75.3
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.7e-113 413.3 278 76.6
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.1e-112 410.6 284 76.8
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 3.8e-110 402.1 278 71.6
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 3.8e-110 402.1 278 71.9
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 9.7e-106 387.5 281 70.5
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.4e-104 382.9 279 69.2
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.0e-103 379.8 278 69.4
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 2.6e-103 379.4 278 70.5
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.7e-102 376.7 286 67.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 3.8e-102 375.6 237 78.1
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 6.5e-102 374.8 315 64.1
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.1e-101 374.0 280 70.0
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 4.2e-101 372.1 278 69.8
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 5.5e-101 371.7 282 69.5
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.4e-101 370.9 293 67.6
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-100 370.2 293 67.6
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 8.0e-100 367.9 279 67.7
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-99 366.7 286 67.8
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 4.0e-99 365.5 222 79.7
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 4.0e-99 365.5 277 67.9
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 6.7e-99 364.8 277 66.8
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 6.7e-99 364.8 278 66.5
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.2e-98 364.0 284 66.5
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 2.0e-98 363.2 267 69.3
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.3e-98 362.5 293 66.6
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.3e-97 360.5 279 68.8
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.3e-97 358.2 278 66.5
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.4e-96 357.1 277 65.0
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.8e-96 356.7 279 67.0
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.1e-96 355.9 285 64.6
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 5.3e-96 355.1 278 66.5
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 7.0e-96 354.8 291 64.9
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.6e-95 353.6 229 78.2
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.0e-95 353.2 276 64.1
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.7e-95 352.8 234 76.9
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.5e-95 352.4 234 76.5
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 5.9e-95 351.7 205 80.5
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 5.9e-95 351.7 277 63.9
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 7.7e-95 351.3 275 64.0
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.7e-94 350.1 277 63.9
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.2e-94 349.7 280 66.8
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.9e-94 349.4 285 64.6
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.9e-94 349.4 205 82.9
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 3.8e-94 349.0 282 64.5
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 3.8e-94 349.0 278 66.5
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.1e-93 347.4 270 67.0
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.9e-93 346.7 254 72.4
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.9e-93 346.7 276 63.8
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.2e-93 345.9 190 88.9
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 5.5e-93 345.1 279 64.9
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.6e-92 342.4 282 64.2
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.8e-91 340.1 272 66.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.0e-91 339.0 296 59.1
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 6.8e-91 338.2 282 63.1
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 3.4e-90 335.9 278 65.1
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 4.4e-90 335.5 222 77.5
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 5.7e-90 335.1 279 64.9
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 7.5e-90 334.7 250 65.6
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.7e-89 333.6 282 63.1
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 2.8e-89 332.8 275 63.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 6.3e-89 331.6 270 63.0
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.4e-88 330.5 276 63.0
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.2e-87 327.4 282 61.3
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 3.5e-87 325.9 204 76.0
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 4.5e-87 325.5 235 68.5
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.9e-86 322.8 278 61.5
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 5.0e-86 322.0 205 73.7
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 8.5e-86 321.2 184 82.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 9.5e-85 317.8 290 60.7
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.8e-84 316.2 243 67.1
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 8.0e-84 314.7 278 60.4
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.0e-84 314.7 235 68.5
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 3.0e-83 312.8 200 78.0
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.2e-82 310.8 287 58.5
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.5e-82 310.5 192 77.1
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.0e-82 310.1 266 62.0
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 2.0e-82 310.1 199 75.4
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 5.7e-82 308.5 189 79.4
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 5.7e-82 308.5 189 79.4
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 5.7e-82 308.5 189 79.4
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.3e-81 307.4 189 78.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.7e-81 307.0 198 75.3
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 1.4e-80 303.9 224 69.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-78 296.6 278 59.7
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 7.3e-77 291.6 240 62.9
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.0e-75 287.7 195 68.7
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 2.2e-73 280.0 275 57.5
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 3.7e-73 279.3 275 57.5
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.0e-71 273.5 243 59.3
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.5e-71 272.7 166 78.9
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 4.1e-64 249.2 187 61.5
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 5.6e-61 238.8 187 58.8
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.3e-53 212.6 121 86.0
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.0e-50 203.8 130 74.6
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.2e-48 196.4 180 53.9
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 6.6e-46 188.7 102 85.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.3e-37 159.5 93 84.9
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.6e-29 132.5 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 1.1e-24 118.2 134 50.0
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.2e-23 114.8 181 41.4
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.7e-23 113.6 95 62.1
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 7.9e-15 85.5 97 40.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 1.3e-14 84.7 87 50.6
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 5.9e-10 69.3 174 29.3
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.9e-08 64.3 117 41.9
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.2e-07 61.6 34 85.3


User provided reference genes

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