Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 0.0e+00 1481.8 834 100.0
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 0.0e+00 1324.3 838 86.4
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 3.9e-279 964.9 866 67.1
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 8.0e-272 940.6 913 63.3
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 3.8e-181 639.4 972 49.5
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 1.1e-164 584.7 946 46.6
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 3.0e-162 576.6 951 47.8
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 1.2e-158 564.7 937 46.5
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 1.5e-158 564.3 870 48.0
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 9.4e-156 555.1 936 47.2
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 2.9e-133 480.3 901 43.4
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 3.6e-131 473.4 880 43.0
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 6.8e-130 469.2 887 41.6
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 8.3e-128 462.2 1002 40.0
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 2.4e-103 380.9 1016 37.5
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.0e-101 375.6 911 37.7
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 2.3e-101 374.4 916 37.4
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 1.5e-89 335.1 921 36.3
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 3.2e-87 327.4 953 34.1
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 1.0e-85 322.4 990 34.5
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 1.3e-85 322.0 875 37.4
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 1.1e-82 312.4 955 34.0
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 2.4e-82 311.2 930 34.0
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 3.2e-79 300.8 847 34.6
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 4.2e-79 300.4 938 34.5
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.5e-79 300.1 902 34.6
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 5.5e-79 300.1 871 33.1
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 9.6e-76 289.3 858 36.2
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 3.7e-75 287.3 924 33.0
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 6.2e-75 286.6 933 33.4
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 4.2e-71 273.9 888 34.2
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 4.2e-71 273.9 909 33.1
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 1.9e-68 265.0 878 32.7
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 9.6e-68 262.7 913 32.3
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.8e-67 261.2 905 32.0
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 2.8e-67 261.2 878 35.3
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 3.7e-67 260.8 884 32.2
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 2.6e-65 254.6 886 31.6
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 4.5e-65 253.8 901 32.0
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 1.3e-64 252.3 930 31.5
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.9e-63 248.4 932 30.7
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 5.5e-63 246.9 951 30.3
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 7.2e-63 246.5 865 32.9
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 9.3e-63 246.1 899 31.4
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.9e-60 238.4 902 32.2
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 2.5e-60 238.0 882 31.0
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 1.8e-58 231.9 950 30.1
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 3.4e-57 227.6 897 33.1
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 4.5e-57 227.3 885 32.0
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 3.8e-56 224.2 904 31.9
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 6.5e-56 223.4 324 48.8
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 1.9e-55 221.9 900 30.1
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 2.5e-55 221.5 892 31.5
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 4.2e-55 220.7 911 31.3
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 1.6e-54 218.8 969 31.3
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 4.6e-54 217.2 907 31.6
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 3.3e-52 211.1 900 30.7
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 4.3e-52 210.7 886 32.4
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 6.3e-51 206.8 899 30.5
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.4e-50 205.7 844 30.9
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 7.7e-49 199.9 1031 29.1
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 8.5e-48 196.4 852 30.5
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 5.5e-47 193.7 989 28.9
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 7.2e-47 193.4 887 31.5
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 9.4e-47 193.0 916 30.2
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 4.7e-46 190.7 969 29.7
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 1.0e-45 189.5 929 29.3
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 2.3e-45 188.3 844 30.9
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 2.6e-44 184.9 898 29.5
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 5.7e-44 183.7 911 29.9
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 2.2e-43 181.8 837 29.5
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 3.7e-43 181.0 888 31.3
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 3.7e-43 181.0 268 51.5
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 1.1e-42 179.5 895 30.3
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.4e-42 179.1 842 29.9
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 4.1e-42 177.6 898 30.8
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 2.6e-41 174.9 855 28.5
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 4.5e-41 174.1 912 27.6
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 6.5e-40 170.2 855 29.1
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 1.1e-39 169.5 925 29.4
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.5e-39 169.1 909 27.9
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 9.4e-39 166.4 832 28.7
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 1.2e-38 166.0 317 41.6
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.6e-38 165.6 878 28.7
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 2.1e-38 165.2 854 28.0
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 2.1e-38 165.2 858 28.9
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 3.6e-38 164.5 945 29.8
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 6.1e-38 163.7 937 29.6
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.0e-37 162.9 850 27.5
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 1.0e-37 162.9 892 27.1
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 2.3e-37 161.8 878 27.7
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 2.3e-37 161.8 847 27.9
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 3.0e-37 161.4 925 29.0
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.0e-37 161.0 851 27.8
VMungo1215G3006 Vigna mungo HOM05D004628 ORTHO05D005166 7.5e-36 156.8 136 66.2
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 1.8e-34 152.1 853 28.0
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 1.8e-34 152.1 327 38.5
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 4.1e-34 151.0 959 28.1
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 5.3e-34 150.6 927 28.7
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 1.2e-33 149.4 836 28.2
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 1.2e-33 149.4 841 26.9
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 1.7e-32 145.6 938 26.5
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 6.1e-30 137.1 893 30.1
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 6.1e-30 137.1 931 27.8
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 4.0e-29 134.4 923 27.7
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 1.2e-28 132.9 927 27.5
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 9.8e-28 129.8 944 26.7
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 2.2e-27 128.6 936 27.4
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 3.7e-27 127.9 864 27.2
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 4.8e-27 127.5 930 27.0
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 7.0e-26 123.6 178 50.0
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 7.0e-26 123.6 883 26.3
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.2e-25 122.9 158 53.2
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.0e-24 119.8 836 26.4
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 8.5e-24 116.7 420 33.6
Psat2g146240 Pisum sativum HOM05D004628 ORTHO05D005166 1.6e-22 112.5 301 35.5
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 3.0e-21 108.2 907 25.8
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 5.2e-21 107.5 364 32.7
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 6.8e-21 107.1 919 27.0
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 4.4e-20 104.4 932 25.5
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 2.2e-19 102.1 948 25.6
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 3.7e-19 101.3 931 25.0
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 6.3e-19 100.5 955 24.4
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 1.1e-18 99.8 934 24.8
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 2.3e-16 92.0 923 25.4
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 8.6e-16 90.1 157 45.9
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.1e-15 89.7 881 25.9
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 3.6e-14 84.7 203 38.9
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 4.0e-13 81.3 104 49.0
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 8.9e-13 80.1 280 32.5
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 8.9e-13 80.1 788 23.9
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 2.6e-12 78.6 60 73.3
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 5.7e-12 77.4 204 38.2
Nn5g30859 Nelumbo nucifera HOM05D004628 ORTHO05D005166 5.7e-12 77.4 115 46.1
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 8.3e-11 73.6 316 32.0
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 8.3e-11 73.6 280 32.9
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 1.1e-10 73.2 1000 24.3
Psat5g192240 Pisum sativum HOM05D004628 ORTHO05D005166 3.2e-10 71.6 92 48.9
Psat0ss6263g0080 Pisum sativum HOM05D004165 ORTHO05D005166 5.4e-10 70.9 100 52.0
arahy.Tifrunner.gnm1.ann1.Z9P2D3 Arachis hypogaea HOM05D004628 ORTHO05D005166 2.7e-09 68.6 129 48.1
BcaNung07335 Brassica carinata HOM05D004628 ORTHO05D005166 2.7e-09 68.6 61 62.3
Psat7g034040 Pisum sativum HOM05D000070 ORTHO05D007395 1.3e-08 66.2 133 42.1
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.7e-08 65.9 83 45.8
Nn1g01808 Nelumbo nucifera HOM05D004628 ORTHO05D005166 1.7e-08 65.9 82 51.2
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 2.3e-08 65.5 87 51.7
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.3e-08 65.5 104 48.1
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 3.9e-08 64.7 80 50.0
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 3.9e-08 64.7 360 28.3
Psat3g068120 Pisum sativum HOM05D000847 ORTHO05D002691 7.3e-07 60.5 87 42.5
arahy.Tifrunner.gnm1.ann1.L3UHBM Arachis hypogaea HOM05D004628 ORTHO05D005166 3.6e-06 58.2 61 62.3
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 3.6e-06 58.2 123 39.0


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