Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 1.9e-68 262.3 129 100.0
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 6.5e-56 220.7 130 88.5
Glyma.07G259700 Glycine max HOM05D008677 ORTHO05D002434 3.1e-50 201.8 129 82.2
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 1.2e-49 199.9 131 81.7
Glyma.17G014600 Glycine max HOM05D008677 ORTHO05D002434 4.7e-46 188.0 129 77.5
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 3.0e-45 185.3 131 79.4
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 2.9e-40 168.7 132 74.2
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 2.5e-39 165.6 126 72.2
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 6.8e-37 157.5 132 71.2
Phvul.003G078000 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 1.5e-36 156.4 165 57.6
VMungo1215G0105 Vigna mungo HOM05D008677 ORTHO05D002434 2.6e-36 155.6 130 66.9
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 5.9e-33 144.4 126 62.7
VMungo1215G2206 Vigna mungo HOM05D008677 ORTHO05D002434 5.0e-32 141.4 126 63.5
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.2e-30 136.7 133 59.4
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 1.6e-30 136.3 132 56.8
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.0e-29 133.7 135 57.8
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 2.6e-28 129.0 132 56.8
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 1.7e-27 126.3 136 59.6
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 6.3e-27 124.4 134 57.5
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 2.4e-26 122.5 133 56.4
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 4.1e-26 121.7 137 54.0
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 7.0e-26 120.9 127 54.3
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 7.3e-23 110.9 146 48.6
Lalb_Chr07g0177271 Lupinus albus HOM05D008677 ORTHO05D002434 2.8e-22 109.0 138 50.0
Medtr4g132000 Medicago truncatula HOM05D008677 ORTHO05D002434 1.4e-21 106.7 145 49.7
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 4.0e-21 105.1 133 49.6
Ca_00640_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 3.4e-20 102.1 103 59.2
Ca_21088_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 5.7e-20 101.3 159 44.7
Ca_30196_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 5.7e-20 101.3 159 44.7
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 2.2e-19 99.4 141 46.8
Medtr4g132010 Medicago truncatula HOM05D008677 ORTHO05D002434 4.9e-19 98.2 147 46.9
Psat4g006720 Pisum sativum HOM05D008677 ORTHO05D002434 1.8e-18 96.3 147 45.6
Psat4g006760 Pisum sativum HOM05D008677 ORTHO05D002434 2.4e-18 95.9 147 45.6
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 3.2e-18 95.5 126 46.8
arahy.Tifrunner.gnm1.ann1.PG586I Arachis hypogaea HOM05D008677 ORTHO05D002434 1.0e-16 90.5 151 45.0
Psat4g006800 Pisum sativum HOM05D008677 ORTHO05D002434 3.9e-16 88.6 146 43.2
Psat4g007000 Pisum sativum HOM05D008677 ORTHO05D002434 1.5e-15 86.7 146 41.8
Psat4g006840 Pisum sativum HOM05D008677 ORTHO05D002434 3.3e-15 85.5 142 45.8
TPR.G37017 Trifolium pratense HOM05D008677 ORTHO05D002434 3.3e-15 85.5 151 40.4
TPR.G36987 Trifolium pratense HOM05D008677 ORTHO05D002434 7.3e-15 84.3 156 41.0
Glyma.13G205200 Glycine max HOM05D008677 ORTHO05D002434 8.0e-14 80.9 84 54.8
arahy.Tifrunner.gnm1.ann1.W7920A Arachis hypogaea HOM05D008677 ORTHO05D002434 2.9e-11 72.4 133 39.8
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 6.4e-11 71.2 131 37.4
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 6.4e-11 71.2 132 36.4
Psat4g006960 Pisum sativum HOM05D008677 ORTHO05D002434 1.9e-10 69.7 88 48.9
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.9e-10 69.7 127 36.2
Lj4g0000389 Lotus japonicus HOM05D008677 ORTHO05D002434 4.1e-10 68.6 127 41.7
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.1e-10 68.6 132 34.1
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 5.4e-10 68.2 127 35.4
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 5.4e-10 68.2 131 37.4
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 7.0e-10 67.8 141 38.3
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 9.2e-10 67.4 131 38.9
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.2e-09 67.0 127 36.2
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.2e-09 67.0 131 38.9
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.6e-09 66.6 129 38.0
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.6e-09 66.6 131 38.9
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 2.0e-09 66.2 134 32.8
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 4.6e-09 65.1 131 34.4
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 4.6e-09 65.1 132 34.1
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.6e-09 65.1 132 34.1
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.6e-09 65.1 131 37.4
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 7.8e-09 64.3 138 37.0
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.3e-08 63.5 134 35.1
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.3e-08 63.5 132 35.6
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.3e-08 63.5 131 32.8
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.3e-08 63.5 132 34.8
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.0e-08 62.4 131 32.8
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 3.0e-08 62.4 139 35.3
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 3.0e-08 62.4 129 34.9
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 3.0e-08 62.4 132 32.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 6.6e-08 61.2 131 35.9
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 6.6e-08 61.2 132 34.8
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 6.6e-08 61.2 137 34.3
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 8.6e-08 60.8 136 33.1
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.1e-07 60.5 128 35.9
DCAR_022560 Daucus carota HOM05D003074 ORTHO05D002434 1.1e-07 60.5 138 34.8
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.5e-07 60.1 133 33.1
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.9e-07 59.7 139 36.0
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 1.9e-07 59.7 129 34.1
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.9e-07 59.7 132 34.8
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 2.5e-07 59.3 131 37.4
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 3.3e-07 58.9 127 33.1
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 4.3e-07 58.5 128 32.8
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 5.6e-07 58.2 141 34.0
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 5.6e-07 58.2 131 32.8
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 5.6e-07 58.2 135 36.3
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 5.6e-07 58.2 134 33.6
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 7.3e-07 57.8 134 35.8
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 7.3e-07 57.8 126 34.1
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-06 57.0 137 33.6
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.6e-06 56.6 117 35.0
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 1.6e-06 56.6 127 32.3
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.6e-06 56.6 140 30.7
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.1e-06 56.2 128 36.7
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.8e-06 55.8 128 33.6
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.8e-06 55.8 128 33.6
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 3.6e-06 55.5 127 35.4
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.6e-06 55.5 121 33.9
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.7e-06 55.1 128 32.8
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 6.2e-06 54.7 128 32.8
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 6.2e-06 54.7 128 33.6
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.2e-06 54.7 128 33.6
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 6.2e-06 54.7 133 33.8


User provided reference genes

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