Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 1.1e-44 183.0 92 100.0
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.1e-41 172.9 92 93.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 7.9e-40 166.8 92 89.1
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.7e-37 159.1 90 86.7
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 2.1e-32 142.1 89 78.7
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 6.1e-32 140.6 89 78.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 7.5e-30 133.7 90 76.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.3e-29 132.9 100 64.0
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.7e-29 132.5 100 63.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-29 132.5 100 63.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-29 132.5 100 63.0
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 3.7e-29 131.3 91 69.2
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.7e-29 131.3 100 63.0
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.8e-28 129.0 74 82.4
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 4.1e-28 127.9 84 73.8
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 4.1e-28 127.9 94 67.0
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 4.1e-28 127.9 78 75.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 4.1e-28 127.9 94 66.0
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 9.1e-28 126.7 73 79.5
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.2e-27 126.3 73 80.8
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 1.6e-27 125.9 84 72.6
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.6e-27 125.9 74 77.0
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.6e-27 125.9 79 74.7
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.0e-27 125.6 73 78.1
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.7e-27 125.2 79 75.9
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 7.7e-27 123.6 74 74.3
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.0e-26 123.2 74 77.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.3e-26 122.9 85 69.4
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.2e-26 122.1 73 75.3
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.2e-26 122.1 79 72.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.9e-26 121.7 79 73.4
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.9e-26 121.7 79 73.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 2.9e-26 121.7 74 77.0
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.8e-26 121.3 78 73.1
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 5.0e-26 120.9 85 69.4
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 6.5e-26 120.6 74 73.0
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 8.5e-26 120.2 77 70.1
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.5e-26 120.2 79 69.6
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 8.5e-26 120.2 88 69.3
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.5e-25 119.4 79 72.2
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 2.5e-25 118.6 74 68.9
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 79 68.4
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 3.2e-25 118.2 74 75.7
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.2e-25 118.2 78 70.5
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 4.2e-25 117.9 80 70.0
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 5.5e-25 117.5 77 68.8
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 5.5e-25 117.5 80 68.8
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 5.5e-25 117.5 80 68.8
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 5.5e-25 117.5 80 68.8
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.5e-25 117.5 79 68.4
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.2e-25 117.1 78 69.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.2e-24 116.3 78 66.7
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.6e-24 115.9 77 68.8
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 2.1e-24 115.5 73 74.0
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 3.6e-24 114.8 78 66.7
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 3.6e-24 114.8 72 72.2
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 3.6e-24 114.8 79 69.6
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 6.1e-24 114.0 69 79.7
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 6.1e-24 114.0 87 63.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 6.1e-24 114.0 73 72.6
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 8.0e-24 113.6 73 74.0
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.8e-23 112.5 80 63.8
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.3e-23 112.1 65 83.1
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 4.0e-23 111.3 83 60.2
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 4.0e-23 111.3 74 64.9
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.5e-22 109.4 74 71.6
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 2.6e-22 108.6 78 64.1
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 2.6e-22 108.6 78 64.1
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 3.4e-22 108.2 82 64.6
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 5.7e-22 107.5 81 64.2
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 5.7e-22 107.5 88 62.5
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 9.8e-22 106.7 72 65.3
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.8e-22 106.7 72 70.8
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.7e-21 105.9 72 70.8
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 4.8e-21 104.4 82 63.4
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 8.3e-21 103.6 72 66.7
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.1e-20 103.2 82 62.2
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 5.4e-20 100.9 73 58.9
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.7e-19 98.6 60 68.3
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 7.7e-19 97.1 75 64.0
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.3e-18 96.3 101 51.5
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 2.9e-18 95.1 74 59.5
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 5.0e-18 94.4 72 61.1
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.5e-14 82.8 87 43.7
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 2.8e-13 78.6 49 71.4
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 3.7e-13 78.2 82 51.2
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 3.1e-12 75.1 51 68.6
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 4.1e-12 74.7 50 64.0
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 7.8e-11 70.5 47 70.2
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 5.6e-09 64.3 41 68.3
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 9.5e-09 63.5 98 40.8
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 1.0e-07 60.1 50 60.0


User provided reference genes

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