Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 6.5e-103 377.5 202 100.0
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 2.8e-82 308.9 207 87.9
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 2.3e-68 262.7 213 74.2
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.9e-65 253.1 199 73.9
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 3.5e-48 195.7 188 63.3
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.5e-46 189.5 171 63.7
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 4.4e-43 178.7 158 68.4
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 2.2e-42 176.4 157 64.3
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 2.5e-38 162.9 192 58.3
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.4e-33 147.1 164 54.9
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 9.3e-33 144.4 166 53.6
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 3.9e-31 139.0 142 57.0
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.1e-29 133.3 205 43.9
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 5.3e-28 128.6 203 46.3
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 9.9e-27 124.4 212 44.3
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 3.2e-25 119.4 217 40.1
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 9.6e-22 107.8 202 38.1
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 6.2e-21 105.1 159 45.3
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 1.8e-20 103.6 210 40.0
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 9.0e-20 101.3 206 37.9
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 1.5e-19 100.5 198 36.4
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 2.0e-19 100.1 147 46.3
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 2.0e-19 100.1 198 38.9
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 4.5e-19 99.0 206 36.9
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 1.0e-18 97.8 171 43.3
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.3e-18 97.4 153 45.1
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 2.2e-18 96.7 193 40.9
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 4.9e-18 95.5 160 41.9
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 7.1e-17 91.7 213 37.1
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 7.1e-17 91.7 180 41.1
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.7e-16 89.7 185 36.8
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.3e-15 87.4 157 43.3
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 5.1e-15 85.5 152 40.1
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 1.1e-14 84.3 185 35.7
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 9.6e-14 81.3 206 36.4
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.6e-13 80.5 149 41.6
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 2.1e-13 80.1 154 36.4
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 6.2e-13 78.6 163 36.8
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 3.8e-10 69.3 199 27.6
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.9e-09 67.0 105 46.7
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 3.2e-09 66.2 142 31.7
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 3.2e-09 66.2 174 33.9
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 4.2e-09 65.9 92 44.6
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 2.1e-08 63.5 194 32.5
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 6.1e-08 62.0 132 29.5
Medtr4g118430 Medicago truncatula HOM05D008610 ORTHO05D010832 1.3e-07 60.8 106 41.5
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 2.3e-07 60.1 137 30.7
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 3.0e-07 59.7 158 31.6
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 8.7e-07 58.2 157 28.7
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 8.7e-07 58.2 137 30.7
Lalb_Chr20g0108401 Lupinus albus HOM05D003014 ORTHO05D003233 1.1e-06 57.8 185 30.3
ECA240G1347 Erigeron canadensis HOM05D003014 ORTHO05D003233 1.5e-06 57.4 175 28.6
SalBow6G1753 Salvia bowleyana HOM05D003014 ORTHO05D003233 1.9e-06 57.0 140 32.1
Glyma.02G103200 Glycine max HOM05D003014 ORTHO05D003233 3.3e-06 56.2 202 27.7
Thecc.02G102900 Theobroma cacao HOM05D003014 ORTHO05D003233 7.4e-06 55.1 180 25.0
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 9.7e-06 54.7 155 31.0
Medtr4g085700 Medicago truncatula HOM05D003014 ORTHO05D003233 9.7e-06 54.7 221 26.2


User provided reference genes

Program Settings