Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.6e-87 326.2 183 100.0
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 2.7e-79 298.9 186 90.3
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 7.8e-71 270.8 188 83.0
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.1e-69 266.9 189 81.5
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 2.3e-59 232.6 183 76.5
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 1.2e-42 177.2 185 62.7
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 3.8e-41 172.2 181 63.0
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 3.0e-38 162.5 183 61.2
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 4.9e-33 145.2 179 58.7
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.1e-32 144.1 203 51.2
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.4e-32 142.9 203 50.2
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 7.1e-32 141.4 203 49.3
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 8.7e-30 134.4 205 49.3
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 9.6e-29 131.0 193 50.3
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.6e-28 130.2 148 60.8
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 6.2e-28 128.3 200 49.5
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 3.1e-27 125.9 207 48.3
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 6.9e-27 124.8 189 49.2
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 9.0e-27 124.4 200 50.5
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 1.5e-26 123.6 203 47.8
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 2.6e-26 122.9 184 50.5
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.3e-25 120.6 185 46.5
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 6.4e-25 118.2 123 62.6
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.4e-24 117.1 179 46.9
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 5.5e-24 115.2 150 52.7
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.6e-23 113.6 181 53.6
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 1.6e-23 113.6 203 49.8
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.7e-23 112.8 187 48.1
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 3.5e-23 112.5 187 48.1
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 4.6e-23 112.1 204 50.0
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 4.6e-23 112.1 198 47.5
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 7.9e-23 111.3 145 53.1
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.3e-22 110.5 150 50.7
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 8.7e-22 107.8 198 38.4
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 1.1e-21 107.5 207 48.3
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 1.9e-21 106.7 202 46.5
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 9.6e-21 104.4 151 53.0
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 9.6e-21 104.4 151 53.0
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.6e-20 103.6 155 45.8
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 2.1e-20 103.2 207 45.4
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 2.1e-20 103.2 210 46.2
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.7e-20 102.4 203 47.3
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 4.8e-20 102.1 186 48.9
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.8e-20 102.1 201 45.3
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 8.2e-20 101.3 192 44.3
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 1.1e-19 100.9 190 44.7
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.1e-19 100.9 208 47.6
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.1e-19 99.4 166 47.6
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 3.1e-19 99.4 179 46.4
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 3.1e-19 99.4 203 46.3
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 4.0e-19 99.0 193 40.4
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 5.3e-19 98.6 179 47.5
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 5.3e-19 98.6 180 46.7
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 5.3e-19 98.6 144 47.2
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 9.0e-19 97.8 184 41.8
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 9.0e-19 97.8 180 42.8
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 9.0e-19 97.8 194 45.4
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 2.6e-18 96.3 151 51.7
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 3.4e-18 95.9 199 44.7
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 7.6e-18 94.7 200 46.0
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 7.6e-18 94.7 190 47.4
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.3e-17 94.0 188 41.0
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.3e-17 94.0 134 41.8
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 2.2e-17 93.2 123 56.1
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.9e-17 92.8 150 47.3
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 2.9e-17 92.8 202 43.6
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.9e-17 92.8 202 43.6
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.8e-17 92.4 147 44.9
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 6.5e-17 91.7 202 43.1
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.1e-16 90.9 185 43.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 1.4e-16 90.5 205 45.4
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.4e-16 90.5 171 45.6
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.4e-16 90.5 191 43.5
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 2.5e-16 89.7 205 43.9
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.5e-16 89.7 195 44.6
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 4.2e-16 89.0 192 47.4
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 7.1e-16 88.2 134 47.0
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.1e-15 86.7 188 39.9
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.7e-15 86.3 190 44.7
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 7.9e-15 84.7 189 42.3
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 7.9e-15 84.7 190 44.2
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 7.9e-15 84.7 153 47.7
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 1.0e-14 84.3 180 42.2
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.3e-14 84.0 178 44.4
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.3e-14 84.0 195 37.9
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.1e-13 80.9 201 35.3
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 4.3e-13 79.0 149 48.3
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 3.7e-12 75.9 154 43.5
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 4.8e-12 75.5 70 58.6
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 6.3e-12 75.1 95 48.4
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.1e-11 74.3 125 52.0
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.1e-11 74.3 203 39.4
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.4e-11 73.2 192 40.6
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.4e-11 73.2 194 40.7
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 3.1e-11 72.8 61 59.0
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 3.1e-11 72.8 181 39.8
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.2e-10 70.9 112 50.0
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 2.2e-09 66.6 67 55.2
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 1.9e-08 63.5 143 46.2
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 5.5e-08 62.0 201 37.8
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 7.2e-08 61.6 43 62.8
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 2.1e-07 60.1 177 32.2
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 2.7e-07 59.7 164 37.2
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 1.8e-06 57.0 29 75.9


User provided reference genes

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